RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 IFIT1BQ5T764 474 aaKnown RBP17.75■□□□□ 0.43
SNX29P1-201ENST00000548357 STOX1Q6ZVD7 989 aa17.75■□□□□ 0.43
SNX29P1-201ENST00000548357 MTMR8Q96EF0 704 aa17.75■□□□□ 0.43
SNX29P1-201ENST00000548357 PXMP2Q9NR77 195 aa17.75■□□□□ 0.43
SNX29P1-201ENST00000548357 KAT6AQ92794 2004 aa17.75■□□□□ 0.43
SNX29P1-201ENST00000548357 RAD50Q92878 1312 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 BDP1A6H8Y1 2624 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 CFBP00751 764 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 CYP21A2P08686 494 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 SUPT20HL2P0C7V6 817 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 ATP2A2P16615 1042 aaKnown RBP17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 IGFBP4P22692 258 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 HSD17B4P51659 736 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 COL9A3Q14050 684 aaPredicted RBP17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 HIC1Q14526 733 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 CCDC178Q5BJE1 867 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 TMCO2Q7Z6W1 182 aaPredicted RBP17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 RPUSD2Q8IZ73 545 aaKnown RBP17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 NSUN6Q8TEA1 469 aaKnown RBP17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 GPKOWQ92917 476 aaPredicted RBP eCLIP17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 WNT8BQ93098 351 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 UBAC1Q9BSL1 405 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 KRT23Q9C075 422 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 MTIF3Q9H2K0 278 aaKnown RBP17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 CERS4Q9HA82 394 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 SLC28A3Q9HAS3 691 aa17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 DDX41Q9UJV9 622 aaKnown RBP17.74■□□□□ 0.43
SNX29P1-201ENST00000548357 NLRC5Q86WI3 1866 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 LOXHD1Q8IVV2 1947 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 KLRF2D3W0D1 207 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 GH1P01241 217 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 CA3P07451 260 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 ZNF286BP0CG31 522 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 HOXA13P31271 388 aaPredicted RBP17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 PTGISQ16647 500 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 ARHGEF16Q5VV41 709 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 PPP2R2DQ66LE6 453 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 KRT40Q6A162 431 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 MPHOSPH6Q99547 160 aaKnown RBP17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 MRPL11Q9Y3B7 192 aaKnown RBP17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 SUPT16HQ9Y5B9 1047 aaKnown RBP17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 PCDHA11Q9Y5I1 949 aa17.73■□□□□ 0.43
SNX29P1-201ENST00000548357 PALM3A6NDB9 673 aaPredicted RBP17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 CYTH3O43739 400 aa17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 NR3C2P08235 984 aa17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 ZNF200P98182 395 aaPredicted RBP17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 GHRHRQ02643 423 aa17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 STXBP2Q15833 593 aa17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 BRDTQ58F21 947 aaPredicted RBP17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 PIGSQ96S52 555 aa17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 BCAS3Q9H6U6 928 aa17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 CNNM2Q9H8M5 875 aa17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 CTNNA3Q9UI47 895 aa17.72■□□□□ 0.43
SNX29P1-201ENST00000548357 PITPNM1O00562 1244 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 KPNA6O60684 536 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 CHMLP26374 656 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 ANTXR2P58335 489 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 SP2Q02086 613 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 PTPN11Q06124 597 aaPredicted RBP17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 GRM4Q14833 912 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 TJAP1Q5JTD0 557 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 HOMER1Q86YM7 354 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 MCF2L2Q86YR7 1114 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 MICALL1Q8N3F8 863 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 IWS1Q96ST2 819 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 PDCD2LQ9BRP1 358 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 ALG1Q9BT22 464 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 AMNQ9BXJ7 453 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 HDAC6Q9UBN7 1215 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 TELO2Q9Y4R8 837 aa17.71■□□□□ 0.43
SNX29P1-201ENST00000548357 ZBTB5O15062 677 aa17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 PFKMP08237 780 aa17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 MYCLP12524 364 aaPredicted RBP17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 PSEN2P49810 448 aa17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 NT5C2P49902 561 aa17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 TRIM71Q2Q1W2 868 aaKnown RBP17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 TRAF7Q6Q0C0 670 aa17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 SESTD1Q86VW0 696 aa17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 FTOQ9C0B1 505 aaKnown RBP eCLIP17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 GTF2IRD1Q9UHL9 959 aa17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 MRVI1Q9Y6F6 885 aa17.7■□□□□ 0.42
SNX29P1-201ENST00000548357 LCHNA4D1U4 455 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 B4DLN1 442 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 HAS3O00219 553 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 NBNO60934 754 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 RFC2P35250 354 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 MRPL12P52815 198 aaKnown RBP17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 DEFB103AP81534 67 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 TAP1Q03518 808 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 MBTPS1Q14703 1052 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 MFSD10Q14728 455 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 PGM5Q15124 567 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 EMID1Q96A84 441 aaPredicted RBP17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 MAF1Q9H063 256 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 RIOX1Q9H6W3 641 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 THEGQ9P2T0 379 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 NOD1Q9Y239 953 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 PCDHA1Q9Y5I3 950 aa17.69■□□□□ 0.42
SNX29P1-201ENST00000548357 E7EWF7 191 aa17.68■□□□□ 0.42
SNX29P1-201ENST00000548357 EIF3JO75822 258 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms