RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CASTP20810 708 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 DEFB103AP81534 67 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 GPNMBQ14956 572 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 STXBP2Q15833 593 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 TCTN1Q2MV58 587 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 GPATCH4Q5T3I0 446 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 ARHGEF16Q5VV41 709 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 CCDC62Q6P9F0 684 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 PNMA1Q8ND90 353 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 NSUN6Q8TEA1 469 aaKnown RBP13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 KAT2BQ92831 832 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 RMDN3Q96TC7 470 aa13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 RNF41Q9H4P4 317 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-205ENST00000548277 LAMA4Q16363 1823 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 ABCB11O95342 1321 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 CHD7Q9P2D1 2997 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 MYCLP12524 364 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 WDR5P61964 334 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 ZNF200P98182 395 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 ARHGAP1Q07960 439 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 QRICH1Q2TAL8 776 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 CWC27Q6UX04 472 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 LRRC8DQ7L1W4 858 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 IQCA1Q86XH1 822 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 CCDC155Q8N6L0 562 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 C7orf31Q8N865 590 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 GDPD5Q8WTR4 605 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 DHX38Q92620 1227 aaKnown RBP13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 CTAGE1Q96RT6 745 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 EPHX3Q9H6B9 360 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 SIP14410 1827 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 CHD9Q3L8U1 2897 aa13.97□□□□□ -0.17
TRAFD1-205ENST00000548277 NBNO60934 754 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 ZNF286BP0CG31 522 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 CKBP12277 381 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 SELPP16109 830 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 PSEN2P49810 448 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 DGKDQ16760 1214 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 FBXO11Q86XK2 927 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 DGKHQ86XP1 1220 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 RGS22Q8NE09 1264 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 CAGE1Q8TC20 777 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 AFAP1L1Q8TED9 768 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 HLA-CQ95604 372 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 ZSWIM5Q9P217 1185 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 DDX41Q9UJV9 622 aaKnown RBP13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 MICAL3Q7RTP6 2002 aa13.96□□□□□ -0.17
TRAFD1-205ENST00000548277 LPXNO60711 386 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 BAIAP3O94812 1187 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 NR3C2P08235 984 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 PCP11498 1178 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 POU3F3P20264 500 aaPredicted RBP13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 MFAP1P55081 439 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 KIAA0753Q2KHM9 967 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 MCF2L2Q86YR7 1114 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 DHX37Q8IY37 1157 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 ZSCAN10Q96SZ4 725 aaPredicted RBP13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 JMJD4Q9H9V9 463 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 GTF2IRD1Q9UHL9 959 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 COG5Q9UP83 839 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 MRPL11Q9Y3B7 192 aaKnown RBP13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 MRVI1Q9Y6F6 885 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 BRWD1Q9NSI6 2320 aa13.95□□□□□ -0.18
TRAFD1-205ENST00000548277 ZMYM6O95789 1325 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 PARP1P09874 1014 aaKnown RBP13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 HDAC1Q13547 482 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 MFSD10Q14728 455 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 ZNF618Q5T7W0 954 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 CNKSR3Q6P9H4 555 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 NLRC5Q86WI3 1866 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 STAG2Q8N3U4 1231 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 ENAHQ8N8S7 591 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 WNT8BQ93098 351 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 FAM122AQ96E09 287 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 IWS1Q96ST2 819 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 PXMP2Q9NR77 195 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 DIAPH3Q9NSV4 1193 aa13.94□□□□□ -0.18
TRAFD1-205ENST00000548277 EIF3JO75822 258 aaKnown RBP13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 HOXA13P31271 388 aaPredicted RBP13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 IKBKEQ14164 716 aa13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 HIC1Q14526 733 aa13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 CCDC178Q5BJE1 867 aa13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 SESTD1Q86VW0 696 aa13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 PLEKHM2Q8IWE5 1019 aa13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 KHSRPQ92945 711 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 C1QTNF1Q9BXJ1 281 aa13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 SUGCTQ9HAC7 445 aa13.93□□□□□ -0.18
TRAFD1-205ENST00000548277 FAM86C2PA6NEL3 165 aa13.92□□□□□ -0.18
TRAFD1-205ENST00000548277 LAMC2Q13753 1193 aa13.92□□□□□ -0.18
TRAFD1-205ENST00000548277 GPKOWQ92917 476 aaPredicted RBP eCLIP13.92□□□□□ -0.188e-6■■□□□ 13.6
TRAFD1-205ENST00000548277 SPATA33Q96N06 139 aa13.92□□□□□ -0.18
TRAFD1-205ENST00000548277 TGS1Q96RS0 853 aaKnown RBP13.92□□□□□ -0.18
TRAFD1-205ENST00000548277 LRFN3Q9BTN0 628 aa13.92□□□□□ -0.18
TRAFD1-205ENST00000548277 KATNAL1Q9BW62 490 aa13.92□□□□□ -0.18
TRAFD1-205ENST00000548277 AMNQ9BXJ7 453 aa13.92□□□□□ -0.18
TRAFD1-205ENST00000548277 ABHD14A-ACY1A0A1B0GW23 586 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 LINC01553A4QN01 128 aa13.91□□□□□ -0.18
TRAFD1-205ENST00000548277 KLRF2D3W0D1 207 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms