RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 LRRC8DQ7L1W4 858 aa23.44■■□□□ 1.34
GATC-202ENST00000548171 ZNF589Q86UQ0 364 aaPredicted RBP23.44■■□□□ 1.34
GATC-202ENST00000548171 KAT2BQ92831 832 aa23.44■■□□□ 1.34
GATC-202ENST00000548171 CTAGE1Q96RT6 745 aa23.44■■□□□ 1.34
GATC-202ENST00000548171 SIP14410 1827 aa23.44■■□□□ 1.34
GATC-202ENST00000548171 LPXNO60711 386 aa23.43■■□□□ 1.34
GATC-202ENST00000548171 LY6KQ17RY6 165 aa23.43■■□□□ 1.34
GATC-202ENST00000548171 IQCA1Q86XH1 822 aa23.43■■□□□ 1.34
GATC-202ENST00000548171 TBC1D10CQ8IV04 446 aa23.43■■□□□ 1.34
GATC-202ENST00000548171 SYTL5Q8TDW5 730 aaPredicted RBP23.43■■□□□ 1.34
GATC-202ENST00000548171 ZBED2Q9BTP6 218 aa23.43■■□□□ 1.34
GATC-202ENST00000548171 KATNAL1Q9BW62 490 aa23.43■■□□□ 1.34
GATC-202ENST00000548171 XIRP2A4UGR9 3374 aa23.43■■□□□ 1.34
GATC-202ENST00000548171 ABHD14A-ACY1A0A1B0GW23 586 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 EFCAB14O75071 495 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 CXCL10P02778 98 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 GPNMBQ14956 572 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 C7orf31Q8N865 590 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 PNMA1Q8ND90 353 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 EMID1Q96A84 441 aaPredicted RBP23.42■■□□□ 1.34
GATC-202ENST00000548171 TAAR1Q96RJ0 339 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 RMDN3Q96TC7 470 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 UBA5Q9GZZ9 404 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 GTF2IRD1Q9UHL9 959 aa23.42■■□□□ 1.34
GATC-202ENST00000548171 NEDD4P46934 1319 aa23.41■■□□□ 1.34
GATC-202ENST00000548171 ASPRV1Q53RT3 343 aa23.41■■□□□ 1.34
GATC-202ENST00000548171 CHST3Q7LGC8 479 aa23.41■■□□□ 1.34
GATC-202ENST00000548171 DHX38Q92620 1227 aaKnown RBP23.41■■□□□ 1.34
GATC-202ENST00000548171 ZKSCAN3Q9BRR0 538 aa23.41■■□□□ 1.34
GATC-202ENST00000548171 CPVLQ9H3G5 476 aa23.41■■□□□ 1.34
GATC-202ENST00000548171 COL20A1Q9P218 1284 aa23.41■■□□□ 1.34
GATC-202ENST00000548171 DDX41Q9UJV9 622 aaKnown RBP23.41■■□□□ 1.34
GATC-202ENST00000548171 MRPL11Q9Y3B7 192 aaKnown RBP23.41■■□□□ 1.34
GATC-202ENST00000548171 ARIH1Q9Y4X5 557 aaPredicted RBP23.41■■□□□ 1.34
GATC-202ENST00000548171 ZNF213O14771 459 aa23.4■■□□□ 1.34
GATC-202ENST00000548171 EIF3JO75822 258 aaKnown RBP23.4■■□□□ 1.34
GATC-202ENST00000548171 CKBP12277 381 aa23.4■■□□□ 1.34
GATC-202ENST00000548171 HDAC1Q13547 482 aaPredicted RBP23.4■■□□□ 1.34
GATC-202ENST00000548171 LAMC2Q13753 1193 aa23.4■■□□□ 1.34
GATC-202ENST00000548171 ADGRF4Q8IZF3 695 aa23.4■■□□□ 1.34
GATC-202ENST00000548171 TBC1D5Q92609 795 aa23.4■■□□□ 1.34
GATC-202ENST00000548171 ANKS1AQ92625 1134 aa23.4■■□□□ 1.34
GATC-202ENST00000548171 KAT14Q9H8E8 782 aa23.4■■□□□ 1.34
GATC-202ENST00000548171 TRIM6-TRIM34B2RNG4 842 aa23.39■■□□□ 1.33
GATC-202ENST00000548171 GJB5O95377 273 aa23.39■■□□□ 1.33
GATC-202ENST00000548171 PTK7Q13308 1070 aa23.39■■□□□ 1.33
GATC-202ENST00000548171 ARHGEF16Q5VV41 709 aa23.39■■□□□ 1.33
GATC-202ENST00000548171 PPTC7Q8NI37 304 aa23.39■■□□□ 1.33
GATC-202ENST00000548171 RAD9AQ99638 391 aa23.39■■□□□ 1.33
GATC-202ENST00000548171 LCHNA4D1U4 455 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 NBNO60934 754 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 F2P00734 622 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 PSEN2P49810 448 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 DEFB103AP81534 67 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 IKBKEQ14164 716 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 QRICH1Q2TAL8 776 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 FBXO11Q86XK2 927 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 EPHX3Q9H6B9 360 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 HDAC6Q9UBN7 1215 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 MRVI1Q9Y6F6 885 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 MICAL3Q7RTP6 2002 aa23.38■■□□□ 1.33
GATC-202ENST00000548171 KDM4AO75164 1064 aa23.37■■□□□ 1.33
GATC-202ENST00000548171 ERVK-21P61565 698 aa23.37■■□□□ 1.33
GATC-202ENST00000548171 MFSD10Q14728 455 aa23.37■■□□□ 1.33
GATC-202ENST00000548171 SPRED2Q7Z698 418 aa23.37■■□□□ 1.33
GATC-202ENST00000548171 TMCO2Q7Z6W1 182 aaPredicted RBP23.37■■□□□ 1.33
GATC-202ENST00000548171 GDPD5Q8WTR4 605 aa23.37■■□□□ 1.33
GATC-202ENST00000548171 RILPL2Q969X0 211 aa23.37■■□□□ 1.33
GATC-202ENST00000548171 TGS1Q96RS0 853 aaKnown RBP23.37■■□□□ 1.33
GATC-202ENST00000548171 ZSCAN10Q96SZ4 725 aaPredicted RBP23.37■■□□□ 1.33
GATC-202ENST00000548171 LRFN3Q9BTN0 628 aa23.37■■□□□ 1.33
GATC-202ENST00000548171 HCN4Q9Y3Q4 1203 aa23.37■■□□□ 1.33
GATC-202ENST00000548171 HAS3O00219 553 aa23.36■■□□□ 1.33
GATC-202ENST00000548171 DHX16O60231 1041 aaKnown RBP23.36■■□□□ 1.33
GATC-202ENST00000548171 NR3C2P08235 984 aa23.36■■□□□ 1.33
GATC-202ENST00000548171 PARP1P09874 1014 aaKnown RBP23.36■■□□□ 1.33
GATC-202ENST00000548171 EIF2AK2P19525 551 aaKnown RBP23.36■■□□□ 1.33
GATC-202ENST00000548171 KIAA0753Q2KHM9 967 aa23.36■■□□□ 1.33
GATC-202ENST00000548171 TMEM31Q5JXX7 168 aa23.36■■□□□ 1.33
GATC-202ENST00000548171 KCNV1Q6PIU1 500 aa23.36■■□□□ 1.33
GATC-202ENST00000548171 DHX37Q8IY37 1157 aaKnown RBP23.36■■□□□ 1.33
GATC-202ENST00000548171 ALG1Q9BT22 464 aa23.36■■□□□ 1.33
GATC-202ENST00000548171 SUGCTQ9HAC7 445 aa23.36■■□□□ 1.33
GATC-202ENST00000548171 PXMP2Q9NR77 195 aa23.36■■□□□ 1.33
GATC-202ENST00000548171 EMSYQ7Z589 1322 aa23.35■■□□□ 1.33
GATC-202ENST00000548171 HOXD8P13378 290 aaPredicted RBP23.35■■□□□ 1.33
GATC-202ENST00000548171 SDSP20132 328 aa23.35■■□□□ 1.33
GATC-202ENST00000548171 JMJD4Q9H9V9 463 aa23.35■■□□□ 1.33
GATC-202ENST00000548171 MAP3K20Q9NYL2 800 aaKnown RBP23.35■■□□□ 1.33
GATC-202ENST00000548171 LINC01553A4QN01 128 aa23.34■■□□□ 1.33
GATC-202ENST00000548171 PPFIA4O75335 1185 aa23.34■■□□□ 1.33
GATC-202ENST00000548171 CFBP00751 764 aa23.34■■□□□ 1.33
GATC-202ENST00000548171 HSD17B4P51659 736 aa23.34■■□□□ 1.33
GATC-202ENST00000548171 RRP1P56182 461 aaKnown RBP23.34■■□□□ 1.33
GATC-202ENST00000548171 GHRHRQ02643 423 aa23.34■■□□□ 1.33
GATC-202ENST00000548171 TRAF7Q6Q0C0 670 aa23.34■■□□□ 1.33
GATC-202ENST00000548171 ENAHQ8N8S7 591 aaPredicted RBP23.34■■□□□ 1.33
GATC-202ENST00000548171 CRBNQ96SW2 442 aa23.34■■□□□ 1.33
GATC-202ENST00000548171 AMNQ9BXJ7 453 aa23.34■■□□□ 1.33
GATC-202ENST00000548171 MTUS1Q9ULD2 1270 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms