RNA–Protein interactions for RNA: ENST00000547591.5

RAB3IP-210, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-210ENST00000547591 GPR27Q9NS67 375 aa6.77□□□□□ -1.33
RAB3IP-210ENST00000547591 PCDHA2Q9Y5H9 948 aa6.77□□□□□ -1.33
RAB3IP-210ENST00000547591 NPFFR2Q9Y5X5 522 aa6.77□□□□□ -1.33
RAB3IP-210ENST00000547591 ARID1BQ8NFD5 2236 aaPredicted RBP6.77□□□□□ -1.33
RAB3IP-210ENST00000547591 FPR2P25090 351 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 GRIA2P42262 883 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 MTERF2Q49AM1 385 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 SOGA3Q5TF21 947 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 B3GNT8Q7Z7M8 397 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 PANK1Q8TE04 598 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 CHAMP1Q96JM3 812 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 PWWP2AQ96N64 755 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 PCDH18Q9HCL0 1135 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 ARHGEF4Q9NR80 690 aa6.76□□□□□ -1.33
RAB3IP-210ENST00000547591 DLX3O60479 287 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 LIMS1P48059 325 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 FOXO4P98177 505 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 DENND5AQ6IQ26 1287 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 USP53Q70EK8 1073 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 LRP10Q7Z4F1 713 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 DCAF4Q8WV16 495 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 ZFYVE21Q9BQ24 234 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 SPATA9Q9BWV2 254 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 CLDND1Q9NY35 253 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 RAPGEFL1Q9UHV5 662 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 PMF1-BGLAPU3KQ54 211 aa6.75□□□□□ -1.33
RAB3IP-210ENST00000547591 PRODHO43272 600 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 PABPC1P11940 636 aaKnown RBP6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 ATF2P15336 505 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 CACNB2Q08289 660 aaPredicted RBP6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 RBL2Q08999 1139 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 IFRD2Q12894 506 aaPredicted RBP6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 NSMFQ6X4W1 530 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 ETV3LQ6ZN32 361 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 SP8Q8IXZ3 490 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 EPB41L1Q9H4G0 881 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 PLA2G2DQ9UNK4 145 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 ZNF652Q9Y2D9 606 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 SIT1Q9Y3P8 196 aa6.74□□□□□ -1.33
RAB3IP-210ENST00000547591 ARNTLO00327 626 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 SGSM2O43147 1006 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 MAFKO60675 156 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 DGKIO75912 1065 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 LCP1P13796 627 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 MC3RP41968 323 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 SSRP1Q08945 709 aaKnown RBP6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 ZC3H18Q86VM9 953 aaKnown RBP6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 MIB1Q86YT6 1006 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 LINC01356Q8N9X3 169 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 PHF20Q9BVI0 1012 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 BCAS3Q9H6U6 928 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 NGRNQ9NPE2 291 aaKnown RBP6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 FBXL7Q9UJT9 491 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 PALD1Q9ULE6 856 aa6.73□□□□□ -1.33
RAB3IP-210ENST00000547591 CCDC85CA6NKD9 419 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 CYP2C8P10632 490 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 SERINC3Q13530 473 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 KIZQ2M2Z5 673 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 EMC4Q5J8M3 183 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 MILR1Q7Z6M3 343 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 FAM126BQ8IXS8 530 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 SMARCC2Q8TAQ2 1214 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 OSBP2Q969R2 916 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 DDX11Q96FC9 970 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 IPO9Q96P70 1041 aaKnown RBP6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 YIPF4Q9BSR8 244 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 ZCCHC4Q9H5U6 513 aa6.72□□□□□ -1.33
RAB3IP-210ENST00000547591 KRIT1O00522 736 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 HGSO14964 777 aaPredicted RBP6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 SASH1O94885 1247 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 BMP7P18075 431 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 HTRA3P83110 453 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 STEAP3Q658P3 488 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 STYK1Q6J9G0 422 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 CYP4F22Q6NT55 531 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 SPATC1Q76KD6 591 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 PHOSPHO1Q8TCT1 267 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 FNIP1Q8TF40 1166 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 SREK1Q8WXA9 508 aaKnown RBP6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 DEPDC7Q96QD5 511 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 CDC6Q99741 560 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 LUC7LQ9NQ29 371 aaKnown RBP6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 PCDHB4Q9Y5E5 795 aa6.71□□□□□ -1.34
RAB3IP-210ENST00000547591 TRIM13O60858 407 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 PLA2G1BP04054 148 aaKnown RBP6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 INHBBP09529 407 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 GPR85P60893 370 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 RASA3Q14644 834 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 LONRF2Q1L5Z9 754 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 ZC3H12BQ5HYM0 836 aaKnown RBP6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 TTLL10Q6ZVT0 673 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 SCUBE1Q8IWY4 988 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 IFNL3Q8IZI9 196 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 MARCH10Q8NA82 808 aaPredicted RBP6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 MKL1Q969V6 931 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 KCNC2Q96PR1 638 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 PARD6AQ9NPB6 346 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 PFDN2Q9UHV9 154 aa6.7□□□□□ -1.34
RAB3IP-210ENST00000547591 NUB1Q9Y5A7 615 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms