RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CEP55Q53EZ4 464 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 FERMT2Q96AC1 680 aa17.96■□□□□ 0.47
TRAFD1-203ENST00000547063 ASB14A6NK59 587 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 TBX3O15119 743 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 MAFGO15525 162 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 MARCH6O60337 910 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 TDP2O95551 362 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 ME1P48163 572 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 STXBP2Q15833 593 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 CALCRLQ16602 461 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 DPP9Q86TI2 863 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 VSIG10LQ86VR7 867 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 SOCS4Q8WXH5 440 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 CHAMP1Q96JM3 812 aa17.95■□□□□ 0.46
TRAFD1-203ENST00000547063 TNPO2O14787 897 aaKnown RBP17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 TBC1D8O95759 1140 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 PGK2P07205 417 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 OR52Z1P0C646 297 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 MYCLP12524 364 aaPredicted RBP17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 UBXN2AP68543 259 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 LACTBP83111 547 aaPredicted RBP17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 SP3Q02447 781 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 PDE4DQ08499 809 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 GNPTABQ3T906 1256 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 PRR16Q569H4 304 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 ZNF467Q7Z7K2 595 aaPredicted RBP17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 NLRX1Q86UT6 975 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 SLFN12Q8IYM2 578 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 KRI1Q8N9T8 703 aaKnown RBP17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 CDHR1Q96JP9 859 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 FAM20AQ96MK3 541 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 NUDT12Q9BQG2 462 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 MXRA8Q9BRK3 442 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 GDPD2Q9HCC8 539 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 LCTP09848 1927 aa17.94■□□□□ 0.46
TRAFD1-203ENST00000547063 SOWAHBA6NEL2 793 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 MEIS1O00470 390 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 WNT7AO00755 349 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 EDIL3O43854 480 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 CUTAO60888 179 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 PRPF40AO75400 957 aaKnown RBP17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 EIF3JO75822 258 aaKnown RBP17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 EDNRBP24530 442 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 ARHGEF6Q15052 776 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 TMEM266Q2M3C6 531 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 ZNF792Q3KQV3 632 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 MORN1Q5T089 497 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 DTHD1Q6ZMT9 781 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 PLA2G4DQ86XP0 818 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 MSL3Q8N5Y2 521 aaKnown RBP17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 C4orf32Q8N8J7 132 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 GPRASP2Q96D09 838 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 RAB34Q9BZG1 259 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 R3HDMLQ9H3Y0 253 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 SRPRBQ9Y5M8 271 aaKnown RBP17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 UBIAD1Q9Y5Z9 338 aa17.93■□□□□ 0.46
TRAFD1-203ENST00000547063 MGAMO43451 1857 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 FAM86B1E9PN63 330 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 SLC37A4O43826 429 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 FAM86B2P0C5J1 330 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 MARCKSP29966 332 aaPredicted RBP17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 RGS2P41220 211 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 UBE2HP62256 183 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 MAP2K5Q13163 448 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 ADALQ6DHV7 355 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 ZNF579Q8NAF0 562 aaKnown RBP17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 IL31RAQ8NI17 732 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 MORC4Q8TE76 937 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 PURBQ96QR8 312 aaKnown RBP17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 JADE2Q9NQC1 790 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 PLXNA1Q9UIW2 1896 aa17.92■□□□□ 0.46
TRAFD1-203ENST00000547063 IGLV3-22A0A075B6J6 115 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 COBLO75128 1261 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 GNRH1P01148 92 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 HOXC6P09630 235 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 PSMC4P43686 418 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 MRPS9P82933 396 aaKnown RBP17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 MTMR1Q13613 665 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 LENG9Q96B70 501 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 INPP4AQ96PE3 977 aaPredicted RBP17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 MTMR9Q96QG7 549 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 KCNMB3Q9NPA1 279 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 FBXO2Q9UK22 296 aaPredicted RBP17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 PCDHA7Q9UN72 937 aa17.91■□□□□ 0.46
TRAFD1-203ENST00000547063 A0A1W2PQ27 194 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 A0A1W2PQ64 194 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 A0A1W2PQD8 194 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 GPR25O00155 361 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 ITGB5P18084 799 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 HOXD10P28358 340 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 LONP1P36776 959 aaKnown RBP17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 NFKBIBQ15653 356 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 KCNV1Q6PIU1 500 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 MAMDC4Q6UXC1 1216 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 ERO1AQ96HE7 468 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 AK8Q96MA6 479 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 APBA2Q99767 749 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 TMEM60Q9H2L4 133 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 LMBRD1Q9NUN5 540 aa17.9■□□□□ 0.46
TRAFD1-203ENST00000547063 VWA3AA6NCI4 1184 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms