RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 SH3RF1Q7Z6J0 888 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 FCHSD1Q86WN1 690 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 CCDC82Q8N4S0 544 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 COPS5Q92905 334 aa17.04■□□□□ 0.32
CCDC38-205ENST00000546947 TRIM43Q96BQ3 446 aaPredicted RBP17.04■□□□□ 0.32
CCDC38-205ENST00000546947 TLR3O15455 904 aaKnown RBP17.03■□□□□ 0.32
CCDC38-205ENST00000546947 KPNA6O60684 536 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 GH1P01241 217 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 MYCLP12524 364 aaPredicted RBP17.03■□□□□ 0.32
CCDC38-205ENST00000546947 CASTP20810 708 aaKnown RBP17.03■□□□□ 0.32
CCDC38-205ENST00000546947 CCND2P30279 289 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 ITGA7Q13683 1181 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 KCNV1Q6PIU1 500 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 VSIG10LQ86VR7 867 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 TDHQ8IZJ6 230 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 SMARCC2Q8TAQ2 1214 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 AGXT2Q9BYV1 514 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 TMEM39AQ9NV64 488 aa17.03■□□□□ 0.32
CCDC38-205ENST00000546947 NID2Q14112 1375 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 SCN10AQ9Y5Y9 1956 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 A6NJR5 290 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 MEIS2O14770 477 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 STAM2O75886 525 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 SLC34A2O95436 690 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.32
CCDC38-205ENST00000546947 PURAQ00577 322 aaKnown RBP17.02■□□□□ 0.32
CCDC38-205ENST00000546947 C1QBPQ07021 282 aaKnown RBP17.02■□□□□ 0.32
CCDC38-205ENST00000546947 APOBRQ0VD83 1088 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 LY6KQ17RY6 165 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 FAM126BQ8IXS8 530 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 BRF1Q92994 677 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 MTG1Q9BT17 334 aaPredicted RBP17.02■□□□□ 0.32
CCDC38-205ENST00000546947 PCDH10Q9P2E7 1040 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 DDX41Q9UJV9 622 aaKnown RBP17.02■□□□□ 0.32
CCDC38-205ENST00000546947 MRVI1Q9Y6F6 885 aa17.02■□□□□ 0.32
CCDC38-205ENST00000546947 CCDC196A0A1B0GTZ2 297 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 hCG_1642624A0A1W2PR95 340 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 MYL3P08590 195 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 RAG1P15918 1043 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 ARHGAP1Q07960 439 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 FUT2Q10981 343 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 USP17L6PQ6QN14 398 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 RUFY3Q7L099 469 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 IL31RAQ8NI17 732 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 BADQ92934 168 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 PSTPIP2Q9H939 334 aa17.01■□□□□ 0.31
CCDC38-205ENST00000546947 FAM217BQ9NTX9 383 aaPredicted RBP17.01■□□□□ 0.31
CCDC38-205ENST00000546947 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
CCDC38-205ENST00000546947 GRIN2DO15399 1336 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 hCG_1984214I3L0E3 225 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 RGS20O76081 388 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 CD4P01730 458 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 TGFB3P10600 412 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 CDC27P30260 824 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 GNPTABQ3T906 1256 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 PPP1R18Q6NYC8 613 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 HEATR3Q7Z4Q2 680 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 TEX2Q8IWB9 1127 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 ZNF713Q8N859 430 aaPredicted RBP17■□□□□ 0.31
CCDC38-205ENST00000546947 EMID1Q96A84 441 aaPredicted RBP17■□□□□ 0.31
CCDC38-205ENST00000546947 TM6SF1Q9BZW5 370 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 ZSWIM6Q9HCJ5 1215 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 TBX21Q9UL17 535 aa17■□□□□ 0.31
CCDC38-205ENST00000546947 EIF5BO60841 1220 aaKnown RBP16.99■□□□□ 0.31
CCDC38-205ENST00000546947 ITGB8P26012 769 aa16.99■□□□□ 0.31
CCDC38-205ENST00000546947 PSMC6P62333 389 aa16.99■□□□□ 0.31
CCDC38-205ENST00000546947 LAMC2Q13753 1193 aa16.99■□□□□ 0.31
CCDC38-205ENST00000546947 WWC2Q6AWC2 1192 aa16.99■□□□□ 0.31
CCDC38-205ENST00000546947 XRRA1Q6P2D8 792 aa16.99■□□□□ 0.31
CCDC38-205ENST00000546947 DHX37Q8IY37 1157 aaKnown RBP16.99■□□□□ 0.31
CCDC38-205ENST00000546947 AFG1LQ8WV93 481 aa16.99■□□□□ 0.31
CCDC38-205ENST00000546947 GPKOWQ92917 476 aaPredicted RBP eCLIP16.99■□□□□ 0.31
CCDC38-205ENST00000546947 CYP46A1Q9Y6A2 500 aa16.99■□□□□ 0.31
CCDC38-205ENST00000546947 TIMP1P01033 207 aa16.98■□□□□ 0.31
CCDC38-205ENST00000546947 MMP3P08254 477 aa16.98■□□□□ 0.31
CCDC38-205ENST00000546947 ICAM3P32942 547 aa16.98■□□□□ 0.31
CCDC38-205ENST00000546947 ADD1P35611 737 aaKnown RBP16.98■□□□□ 0.31
CCDC38-205ENST00000546947 EVCP57679 992 aa16.98■□□□□ 0.31
CCDC38-205ENST00000546947 MRPS9P82933 396 aaKnown RBP16.98■□□□□ 0.31
CCDC38-205ENST00000546947 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
CCDC38-205ENST00000546947 PCNX4Q63HM2 1172 aa16.98■□□□□ 0.31
CCDC38-205ENST00000546947 PPTC7Q8NI37 304 aa16.98■□□□□ 0.31
CCDC38-205ENST00000546947 INPP4AQ96PE3 977 aaPredicted RBP16.98■□□□□ 0.31
CCDC38-205ENST00000546947 V9GY48 417 aaPredicted RBP16.98■□□□□ 0.31
CCDC38-205ENST00000546947 TRIOBPQ9H2D6 2365 aa16.97■□□□□ 0.31
CCDC38-205ENST00000546947 NAPAP54920 295 aa16.97■□□□□ 0.31
CCDC38-205ENST00000546947 DGKDQ16760 1214 aa16.97■□□□□ 0.31
CCDC38-205ENST00000546947 CELF3Q5SZQ8 465 aaKnown RBP16.97■□□□□ 0.31
CCDC38-205ENST00000546947 NFRKBQ6P4R8 1299 aa16.97■□□□□ 0.31
CCDC38-205ENST00000546947 GLT8D2Q9H1C3 349 aa16.97■□□□□ 0.31
CCDC38-205ENST00000546947 ALDH8A1Q9H2A2 487 aaPredicted RBP16.97■□□□□ 0.31
CCDC38-205ENST00000546947 EHMT1Q9H9B1 1298 aa16.97■□□□□ 0.31
CCDC38-205ENST00000546947 BARHL2Q9NY43 387 aa16.97■□□□□ 0.31
CCDC38-205ENST00000546947 SPDYE3A6NKU9 549 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 STXBP3O00186 592 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 FIBPO43427 364 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 B4GALT4O60513 344 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 GGPS1O95749 300 aa16.96■□□□□ 0.31
CCDC38-205ENST00000546947 SUPT20HL2P0C7V6 817 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms