RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 RPS6KA4O75676 772 aa15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 CYP2D6P10635 497 aa15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 HSPA1LP34931 641 aa15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 RDXP35241 583 aaKnown RBP15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 HERVK_113P62684 666 aa15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 TMEM266Q2M3C6 531 aa15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 GPKOWQ92917 476 aaPredicted RBP eCLIP15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 CNOT6LQ96LI5 555 aaKnown RBP15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 NAP1L4Q99733 375 aaKnown RBP15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 NOC4LQ9BVI4 516 aaKnown RBP15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 NHEJ1Q9H9Q4 299 aaPredicted RBP15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 TSKSQ9UJT2 592 aa15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 RPS6KL1Q9Y6S9 549 aa15.21■□□□□ 0.02
SLC38A1-204ENST00000546893 KAT6BQ8WYB5 2073 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 TACC1O75410 805 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 LCA5LO95447 670 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 SYF2O95926 243 aaKnown RBP15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 RHOXF2BP0C7M4 288 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 PLCG1P19174 1290 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 NOVP48745 357 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 NAPAP54920 295 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 CENPPQ6IPU0 288 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 PPP1R18Q6NYC8 613 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 SV2BQ7L1I2 683 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 PROM2Q8N271 834 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 NEDD1Q8NHV4 660 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 CCDC26Q8TAB7 109 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 FAM210AQ96ND0 272 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 TMEM47Q9BQJ4 181 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 RHOXF2Q9BQY4 288 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 TMEM60Q9H2L4 133 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 RIC8AQ9NPQ8 531 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 C10orf71Q711Q0 1435 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 TRIM49BA6NDI0 452 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 A6NNZ2 444 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 PES1O00541 588 aaKnown RBP15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 CAND2O75155 1236 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 USP17L8P0C7I0 530 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 MYBL2P10244 700 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 CDC25AP30304 524 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 FXR2P51116 673 aaKnown RBP eCLIP15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 ASIC1P78348 528 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 PDIA5Q14554 519 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 TUBB8Q3ZCM7 444 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 UNC13DQ70J99 1090 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 LINC00116Q8NCU8 138 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 CCDC42Q96M95 316 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 ALS2CR12Q96Q35 445 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 LUC7LQ9NQ29 371 aaKnown RBP15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 RNF14Q9UBS8 474 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 PLAGL2Q9UPG8 496 aa15.2■□□□□ 0.02
SLC38A1-204ENST00000546893 SPATA31A6Q5VVP1 1343 aa15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 TMCO5BA8MYB1 307 aa15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 B4DLN1 442 aa15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 KLRF2D3W0D1 207 aa15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 ZPR1O75312 459 aa15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 TBC1D9BQ66K14 1250 aa15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 C16orf86Q6ZW13 317 aa15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 STAG2Q8N3U4 1231 aa15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 GUF1Q8N442 669 aaKnown RBP15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 ZNF526Q8TF50 670 aaPredicted RBP15.19■□□□□ 0.02
SLC38A1-204ENST00000546893 A0A0U1RQJ8 604 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 TCP1P17987 556 aaKnown RBP15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 MAN2A1Q16706 1144 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 MMGT1Q8N4V1 131 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 ATRIPQ8WXE1 791 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 SH3GL3Q99963 347 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 MAPK8IP1Q9UQF2 711 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 A0A0G2JS52 829 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 PMS1P54277 932 aaKnown RBP15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 VWA3BQ502W6 1294 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 TYW1BQ6NUM6 668 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 THOC1Q96FV9 657 aaKnown RBP15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 PCMTD1Q96MG8 357 aaPredicted RBP15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 TSG101Q99816 390 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 IRAK4Q9NWZ3 460 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 TFCP2L1Q9NZI6 479 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 MYH1P12882 1939 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 PLIN4Q96Q06 1357 aa15.18■□□□□ 0.02
SLC38A1-204ENST00000546893 SMCO2A6NFE2 343 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 CYTH3O43739 400 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 CCNT1O60563 726 aaKnown RBP15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 FSBPO95073 299 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 RASA1P20936 1047 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 TXNRD1Q16881 649 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 ANKRD40Q6AI12 368 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 REXO1Q8N1G1 1221 aaKnown RBP15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 RNF10Q8N5U6 811 aaKnown RBP15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 NOA1Q8NC60 698 aaKnown RBP15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 CAGE1Q8TC20 777 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 COG1Q8WTW3 980 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 SYN2Q92777 582 aaPredicted RBP15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 FAM163AQ96GL9 167 aaPredicted RBP15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 SSU72P8A0A1W2PR75 194 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 FRMD3A2A2Y4 597 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 AP1G2O75843 785 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 ATP1A1P05023 1023 aaKnown RBP15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 GRAPQ13588 217 aa15.17■□□□□ 0.02
SLC38A1-204ENST00000546893 GLE1Q53GS7 698 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms