RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 APBA1Q02410 837 aa11.4□□□□□ -0.58
SSH1-203ENST00000546433 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
SSH1-203ENST00000546433 BBOF1Q8ND07 529 aa11.4□□□□□ -0.58
SSH1-203ENST00000546433 FBXO18Q8NFZ0 1043 aa11.4□□□□□ -0.58
SSH1-203ENST00000546433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.4□□□□□ -0.58
SSH1-203ENST00000546433 ELP3Q9H9T3 547 aa11.4□□□□□ -0.58
SSH1-203ENST00000546433 NLRC4Q9NPP4 1024 aa11.4□□□□□ -0.58
SSH1-203ENST00000546433 BCAP29Q9UHQ4 241 aa11.4□□□□□ -0.58
SSH1-203ENST00000546433 BZW2Q9Y6E2 419 aaKnown RBP11.4□□□□□ -0.58
SSH1-203ENST00000546433 TMEM88BA6NKF7 163 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 HADHQ16836 314 aaKnown RBP11.4□□□□□ -0.59
SSH1-203ENST00000546433 ARHGAP44Q17R89 818 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 LONRF3Q496Y0 759 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 ASPRV1Q53RT3 343 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 VSIG1Q86XK7 387 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 DPF3Q92784 378 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 MCUR1Q96AQ8 359 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 PODXL2Q9NZ53 605 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 MYO1AQ9UBC5 1043 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 PALD1Q9ULE6 856 aa11.4□□□□□ -0.59
SSH1-203ENST00000546433 COL14A1Q05707 1796 aaKnown RBP11.4□□□□□ -0.59
SSH1-203ENST00000546433 hCG_1642624A0A1W2PR95 340 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 CAMTA2O94983 1202 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 MYL1P05976 194 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 KRT19P08727 400 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 RASSF2P50749 326 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 RASSF7Q02833 373 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 ITPK1Q13572 414 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 TSNAXIP1Q2TAA8 658 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 ANGEL2Q5VTE6 544 aaKnown RBP11.39□□□□□ -0.59
SSH1-203ENST00000546433 STAMQ92783 540 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 HAUS1Q96CS2 278 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 C1orf112Q9NSG2 853 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 TYW1Q9NV66 732 aaKnown RBP11.39□□□□□ -0.59
SSH1-203ENST00000546433 GNAT1P11488 350 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 KRT15P19012 456 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 SKIV2LQ15477 1246 aaKnown RBP11.39□□□□□ -0.59
SSH1-203ENST00000546433 POLR3EQ9NVU0 708 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 LARSQ9P2J5 1176 aaKnown RBP11.39□□□□□ -0.59
SSH1-203ENST00000546433 ZNF215Q9UL58 517 aaPredicted RBP11.39□□□□□ -0.59
SSH1-203ENST00000546433 KIF28PB7ZC32 967 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 CA12O43570 354 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 RNF40O75150 1001 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 KRT71Q3SY84 523 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 GPATCH4Q5T3I0 446 aaKnown RBP11.39□□□□□ -0.59
SSH1-203ENST00000546433 KANSL2Q9H9L4 492 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 TNNC2P02585 160 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 ATF7P17544 494 aaPredicted RBP11.39□□□□□ -0.59
SSH1-203ENST00000546433 ADD1P35611 737 aaKnown RBP11.39□□□□□ -0.59
SSH1-203ENST00000546433 PDE6CP51160 858 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 RAD51AP2Q09MP3 1159 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 SLC39A14Q15043 492 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 HLFQ16534 295 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 PRR16Q569H4 304 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 LRRC8AQ8IWT6 810 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 VCXQ9H320 206 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 MYOZ2Q9NPC6 264 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 RIC8AQ9NPQ8 531 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 ZHX2Q9Y6X8 837 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 SH3BP5O60239 455 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 LIG4P49917 911 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 SCRN1Q12765 414 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 LRRC24Q50LG9 513 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 FAM102BQ5T8I3 360 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 EXOC8Q8IYI6 725 aa11.39□□□□□ -0.59
SSH1-203ENST00000546433 FTOQ9C0B1 505 aaKnown RBP eCLIP11.39□□□□□ -0.59
SSH1-203ENST00000546433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 CCL15-CCL14A0A0B4J2E2 113 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 ABCD1P33897 745 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 ETF1P62495 437 aaKnown RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 CCL15Q16663 113 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 ABI1Q8IZP0 508 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 NBPF15Q8N660 670 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 TDRD7Q8NHU6 1098 aaKnown RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 TSC1Q92574 1164 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 CD209Q9NNX6 404 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 PPANQ9NQ55 473 aaKnown RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 HOMER3Q9NSC5 361 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 DDX41Q9UJV9 622 aaKnown RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 KIAA1210Q9ULL0 1709 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 PSMD14O00487 310 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 IKBKBO14920 756 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 RGS16O15492 202 aaPredicted RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 CYP2J2P51589 502 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 FAM26FQ5R3K3 315 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 PPP1R2P3Q6NXS1 205 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 SDCCAG8Q86SQ7 713 aaPredicted RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 FAM178BQ8IXR5 827 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 GINM1Q9NU53 330 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 ABCC12Q96J65 1359 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 K7ENM7 598 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 SDR42E1Q8WUS8 393 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 RSAD2Q8WXG1 361 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 RIOK1Q9BRS2 568 aaKnown RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 GCFC2P16383 781 aaKnown RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 EEF1GP26641 437 aaKnown RBP11.38□□□□□ -0.59
SSH1-203ENST00000546433 INHBEP58166 350 aa11.38□□□□□ -0.59
SSH1-203ENST00000546433 PDZD4Q76G19 769 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms