RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CXCL11O14625 94 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 TTLL1O95922 423 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 GTF2A2P52657 109 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 HMGCS2P54868 508 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 ATP2B2Q01814 1243 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 SREBF2Q12772 1141 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 SPP2Q13103 211 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 ZYXQ15942 572 aaKnown RBP7.43□□□□□ -1.22
PRKDC-211ENST00000546304 ADCK5Q3MIX3 580 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 PRRT2Q7Z6L0 340 aaPredicted RBP7.43□□□□□ -1.22
PRKDC-211ENST00000546304 GOLGA6L1Q8N7Z2 621 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 ACER1Q8TDN7 264 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 SCG3Q8WXD2 468 aaKnown RBP7.43□□□□□ -1.22
PRKDC-211ENST00000546304 JAKMIP1Q96N16 626 aaKnown RBP7.43□□□□□ -1.22
PRKDC-211ENST00000546304 KIAA1683Q9H0B3 1180 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 UPF2Q9HAU5 1272 aaKnown RBP7.43□□□□□ -1.22
PRKDC-211ENST00000546304 MTMR4Q9NYA4 1195 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 SYNPO2Q9UMS6 1093 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 STX8Q9UNK0 236 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 AFG3L2Q9Y4W6 797 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 SNX14Q9Y5W7 946 aa7.43□□□□□ -1.22
PRKDC-211ENST00000546304 WDR33Q9C0J8 1336 aaKnown RBP7.43□□□□□ -1.22
PRKDC-211ENST00000546304 RBBP6Q7Z6E9 1792 aaKnown RBP7.43□□□□□ -1.22
PRKDC-211ENST00000546304 CCL15-CCL14A0A0B4J2E2 113 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 A0A1W2PRG0 241 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 MANSC4A6NHS7 340 aaPredicted RBP7.42□□□□□ -1.22
PRKDC-211ENST00000546304 KHNYNO15037 678 aaKnown RBP7.42□□□□□ -1.22
PRKDC-211ENST00000546304 PRC1O43663 620 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 AOC2O75106 756 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 ARAFP10398 606 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 CETPP11597 493 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 EEF2P13639 858 aaKnown RBP7.42□□□□□ -1.22
PRKDC-211ENST00000546304 VCAM1P19320 739 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 CASTP20810 708 aaKnown RBP7.42□□□□□ -1.22
PRKDC-211ENST00000546304 IGFBP4P22692 258 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 MCM5P33992 734 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 GSK3AP49840 483 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 USP14P54578 494 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 MARSP56192 900 aaKnown RBP7.42□□□□□ -1.22
PRKDC-211ENST00000546304 BACE1P56817 501 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 ANTXR2P58335 489 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 ANAPC15P60006 121 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 DGKZQ13574 1117 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 COL9A3Q14050 684 aaPredicted RBP7.42□□□□□ -1.22
PRKDC-211ENST00000546304 SART3Q15020 963 aaKnown RBP7.42□□□□□ -1.22
PRKDC-211ENST00000546304 CCL15Q16663 113 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 LRRC69Q6ZNQ3 347 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 CYB5R4Q7L1T6 521 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 ENAHQ8N8S7 591 aaPredicted RBP7.42□□□□□ -1.22
PRKDC-211ENST00000546304 BRI3BPQ8WY22 251 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 C12orf42Q96LP6 360 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 NEK1Q96PY6 1258 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 HINFPQ9BQA5 517 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 ZKSCAN3Q9BRR0 538 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 BACH2Q9BYV9 841 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 PHACTR1Q9C0D0 580 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 IL17RBQ9NRM6 502 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 TCP11L1Q9NUJ3 509 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 ZSWIM5Q9P217 1185 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 NYAP2Q9P242 653 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 WDR19Q8NEZ3 1342 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 CENPFP49454 3210 aa7.42□□□□□ -1.22
PRKDC-211ENST00000546304 BAZ2BQ9UIF8 2168 aaKnown RBP7.42□□□□□ -1.22
PRKDC-211ENST00000546304 ERICH2A1L162 156 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 DCDC2BA2VCK2 349 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 C19orf81C9J6K1 198 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 SH2B2O14492 632 aaPredicted RBP7.41□□□□□ -1.22
PRKDC-211ENST00000546304 NDUFB10O96000 172 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 HMGB1P09429 215 aaKnown RBP7.41□□□□□ -1.22
PRKDC-211ENST00000546304 TOP1P11387 765 aaKnown RBP7.41□□□□□ -1.22
PRKDC-211ENST00000546304 PSMA5P28066 241 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 NOVP48745 357 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 MOGSQ13724 837 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 CCDC178Q5BJE1 867 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 TMEM67Q5HYA8 995 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 IFIT1BQ5T764 474 aaKnown RBP7.41□□□□□ -1.22
PRKDC-211ENST00000546304 RCSD1Q6JBY9 416 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 BLOC1S2Q6QNY1 142 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 SLCO4C1Q6ZQN7 724 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 GADL1Q6ZQY3 521 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 FASTKD5Q7L8L6 764 aaKnown RBP7.41□□□□□ -1.22
PRKDC-211ENST00000546304 RASGRP2Q7LDG7 609 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 CHST3Q7LGC8 479 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 SIAH1Q8IUQ4 282 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 GMCL1P1Q8NEA9 526 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 LPAR1Q92633 364 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 IL17RAQ96F46 866 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 SCARF2Q96GP6 870 aaPredicted RBP7.41□□□□□ -1.22
PRKDC-211ENST00000546304 TCEANC2Q96MN5 208 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 MTA3Q9BTC8 594 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 C22orf23Q9BZE7 217 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 UPF3BQ9BZI7 483 aaKnown RBP7.41□□□□□ -1.22
PRKDC-211ENST00000546304 VCPKMTQ9H867 229 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 NEUROD4Q9HD90 331 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 AVENQ9NQS1 362 aaPredicted RBP7.41□□□□□ -1.22
PRKDC-211ENST00000546304 TMOD4Q9NZQ9 345 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 CLIP2Q9UDT6 1046 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 AGTPBP1Q9UPW5 1226 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 TMX2Q9Y320 296 aa7.41□□□□□ -1.22
PRKDC-211ENST00000546304 HCN4Q9Y3Q4 1203 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms