RNA–Protein interactions for RNA: ENST00000546248.5

TRDN-205, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-205ENST00000546248 REC114Q7Z4M0 266 aa6.94□□□□□ -1.3
TRDN-205ENST00000546248 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.94□□□□□ -1.3
TRDN-205ENST00000546248 NGDNQ8NEJ9 315 aaKnown RBP6.94□□□□□ -1.3
TRDN-205ENST00000546248 SYTL4Q96C24 671 aaPredicted RBP6.94□□□□□ -1.3
TRDN-205ENST00000546248 C20orf173Q96LM9 149 aa6.94□□□□□ -1.3
TRDN-205ENST00000546248 C8orf37Q96NL8 207 aa6.94□□□□□ -1.3
TRDN-205ENST00000546248 MYH16Q9H6N6 1097 aa6.94□□□□□ -1.3
TRDN-205ENST00000546248 BRMS1Q9HCU9 246 aa6.94□□□□□ -1.3
TRDN-205ENST00000546248 GINM1Q9NU53 330 aa6.94□□□□□ -1.3
TRDN-205ENST00000546248 IL16Q14005 1332 aa6.94□□□□□ -1.3
TRDN-205ENST00000546248 CEP170BQ9Y4F5 1589 aaPredicted RBP6.94□□□□□ -1.3
TRDN-205ENST00000546248 ADAMTSL3P82987 1691 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 OVOS2A0A0J9YW53 1432 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 OVOS2Q6IE36 1432 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 TEX51A0A1B0GUA7 166 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 HOXA5P20719 270 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 BUD31P41223 144 aaPredicted RBP6.93□□□□□ -1.3
TRDN-205ENST00000546248 EXOSC9Q06265 439 aaKnown RBP6.93□□□□□ -1.3
TRDN-205ENST00000546248 SNX17Q15036 470 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 HSP90AB2PQ58FF8 381 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 VPS37DQ86XT2 251 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 SLITRK4Q8IW52 837 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 SIRT2Q8IXJ6 389 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 RASGRP4Q8TDF6 673 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 HDAC8Q9BY41 377 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 LRRC3Q9BY71 257 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 EFR3BQ9Y2G0 817 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 DIP2AQ14689 1571 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 MAPK8IP3Q9UPT6 1336 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 NPHP4O75161 1426 aaPredicted RBP6.93□□□□□ -1.3
TRDN-205ENST00000546248 ANKARQ7Z5J8 1434 aa6.93□□□□□ -1.3
TRDN-205ENST00000546248 FER1L4A9Z1Z3 1794 aa6.92□□□□□ -1.3
TRDN-205ENST00000546248 CT47B1P0C2W7 299 aaPredicted RBP6.92□□□□□ -1.3
TRDN-205ENST00000546248 ZNF853P0CG23 659 aa6.92□□□□□ -1.3
TRDN-205ENST00000546248 DNAJA1P31689 397 aaKnown RBP6.92□□□□□ -1.3
TRDN-205ENST00000546248 LCE5AQ5TCM9 118 aa6.92□□□□□ -1.3
TRDN-205ENST00000546248 USHBP1Q8N6Y0 703 aa6.92□□□□□ -1.3
TRDN-205ENST00000546248 SLC43A3Q8NBI5 491 aa6.92□□□□□ -1.3
TRDN-205ENST00000546248 TSR2Q969E8 191 aaKnown RBP6.92□□□□□ -1.3
TRDN-205ENST00000546248 TNNQ9UQP3 1299 aa6.92□□□□□ -1.3
TRDN-205ENST00000546248 MAP3K19Q56UN5 1328 aa6.92□□□□□ -1.3
TRDN-205ENST00000546248 FANCIQ9NVI1 1328 aa6.92□□□□□ -1.3
TRDN-205ENST00000546248 USP2O75604 605 aaPredicted RBP6.91□□□□□ -1.3
TRDN-205ENST00000546248 UBOX5O94941 541 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 ATF4P18848 351 aaPredicted RBP6.91□□□□□ -1.3
TRDN-205ENST00000546248 GBP1P32455 592 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
TRDN-205ENST00000546248 CTSWP56202 376 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 ARID5AQ03989 594 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 CLCQ05315 142 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 NMIQ13287 307 aaPredicted RBP6.91□□□□□ -1.3
TRDN-205ENST00000546248 GK5Q6ZS86 529 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 NLRX1Q86UT6 975 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 SYTL5Q8TDW5 730 aaPredicted RBP6.91□□□□□ -1.3
TRDN-205ENST00000546248 SPATA32Q96LK8 384 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 KRTAP9-3Q9BYQ3 159 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 PCDHB14Q9Y5E9 798 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 KDM2BQ8NHM5 1336 aa6.91□□□□□ -1.3
TRDN-205ENST00000546248 CDK12Q9NYV4 1490 aaPredicted RBP6.91□□□□□ -1.3
TRDN-205ENST00000546248 RIMS1Q86UR5 1692 aaKnown RBP6.9□□□□□ -1.3
TRDN-205ENST00000546248 RGS13O14921 159 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 RPL10P27635 214 aaKnown RBP6.9□□□□□ -1.3
TRDN-205ENST00000546248 ZNF165P49910 485 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 ARSHQ5FYA8 562 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 SULT6B1Q6IMI4 303 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 RNF111Q6ZNA4 994 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 TMC3Q7Z5M5 1100 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 ENOX1Q8TC92 643 aaKnown RBP6.9□□□□□ -1.3
TRDN-205ENST00000546248 PANK1Q8TE04 598 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 SEC16BQ96JE7 1060 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 THUMPD2Q9BTF0 503 aaKnown RBP6.9□□□□□ -1.3
TRDN-205ENST00000546248 FOXP3Q9BZS1 431 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 CNOT6Q9ULM6 557 aaKnown RBP6.9□□□□□ -1.3
TRDN-205ENST00000546248 PPT2Q9UMR5 302 aa6.9□□□□□ -1.3
TRDN-205ENST00000546248 XRN1Q8IZH2 1706 aaKnown RBP6.9□□□□□ -1.31
TRDN-205ENST00000546248 SLC22A31A6NKX4 558 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 TCERG1O14776 1098 aaKnown RBP6.89□□□□□ -1.31
TRDN-205ENST00000546248 VAMP4O75379 141 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 BMP7P18075 431 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 SNW1Q13573 536 aaKnown RBP6.89□□□□□ -1.31
TRDN-205ENST00000546248 SSPNQ14714 243 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 ADGRF1Q5T601 910 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 FBXW10Q5XX13 1052 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 REXO1Q8N1G1 1221 aaKnown RBP6.89□□□□□ -1.31
TRDN-205ENST00000546248 SSH1Q8WYL5 1049 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 FRAT1Q92837 279 aaPredicted RBP6.89□□□□□ -1.31
TRDN-205ENST00000546248 TCTN2Q96GX1 697 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 ORAI2Q96SN7 254 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 ASCC2Q9H1I8 757 aaPredicted RBP6.89□□□□□ -1.31
TRDN-205ENST00000546248 PARD6AQ9NPB6 346 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 KCTD3Q9Y597 815 aa6.89□□□□□ -1.31
TRDN-205ENST00000546248 SBNO1A3KN83 1393 aa6.88□□□□□ -1.31
TRDN-205ENST00000546248 TMEM82A0PJX8 343 aa6.88□□□□□ -1.31
TRDN-205ENST00000546248 FAM83GA6ND36 823 aa6.88□□□□□ -1.31
TRDN-205ENST00000546248 OR14I1A6ND48 311 aa6.88□□□□□ -1.31
TRDN-205ENST00000546248 IGHDP01880 384 aa6.88□□□□□ -1.31
TRDN-205ENST00000546248 POLR2BP30876 1174 aaKnown RBP6.88□□□□□ -1.31
TRDN-205ENST00000546248 HOXC9P31274 260 aa6.88□□□□□ -1.31
TRDN-205ENST00000546248 SOX9P48436 509 aa6.88□□□□□ -1.31
TRDN-205ENST00000546248 AMPHP49418 695 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms