RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ARHGAP1Q07960 439 aa17.36■□□□□ 0.37
RTN3-214ENST00000545432 CCDC96Q2M329 555 aa17.36■□□□□ 0.37
RTN3-214ENST00000545432 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
RTN3-214ENST00000545432 EMID1Q96A84 441 aaPredicted RBP17.36■□□□□ 0.37
RTN3-214ENST00000545432 C19orf67A6NJJ6 358 aa17.35■□□□□ 0.37
RTN3-214ENST00000545432 PDHBP11177 359 aa17.35■□□□□ 0.37
RTN3-214ENST00000545432 CASTP20810 708 aaKnown RBP17.35■□□□□ 0.37
RTN3-214ENST00000545432 KCNA5P22460 613 aa17.35■□□□□ 0.37
RTN3-214ENST00000545432 PTK7Q13308 1070 aa17.35■□□□□ 0.37
RTN3-214ENST00000545432 IKBKEQ14164 716 aa17.35■□□□□ 0.37
RTN3-214ENST00000545432 MBTPS1Q14703 1052 aa17.35■□□□□ 0.37
RTN3-214ENST00000545432 PTCRAQ6ISU1 281 aaPredicted RBP17.35■□□□□ 0.37
RTN3-214ENST00000545432 MRPL38Q96DV4 380 aaKnown RBP17.35■□□□□ 0.37
RTN3-214ENST00000545432 INSL6Q9Y581 213 aa17.35■□□□□ 0.37
RTN3-214ENST00000545432 GH1P01241 217 aa17.34■□□□□ 0.37
RTN3-214ENST00000545432 HOXD8P13378 290 aaPredicted RBP17.34■□□□□ 0.37
RTN3-214ENST00000545432 MRE11P49959 708 aa17.34■□□□□ 0.37
RTN3-214ENST00000545432 ZNF543Q08ER8 600 aa17.34■□□□□ 0.37
RTN3-214ENST00000545432 TTC14Q96N46 770 aa17.34■□□□□ 0.37
RTN3-214ENST00000545432 HDAC6Q9UBN7 1215 aa17.34■□□□□ 0.37
RTN3-214ENST00000545432 RANBP6O60518 1105 aaKnown RBP17.33■□□□□ 0.36
RTN3-214ENST00000545432 NHLH1Q02575 133 aa17.33■□□□□ 0.36
RTN3-214ENST00000545432 GPCPD1Q9NPB8 672 aa17.33■□□□□ 0.36
RTN3-214ENST00000545432 PRKAG3Q9UGI9 489 aa17.33■□□□□ 0.36
RTN3-214ENST00000545432 CTNNA3Q9UI47 895 aa17.33■□□□□ 0.36
RTN3-214ENST00000545432 FRMPD2Q68DX3 1309 aaPredicted RBP17.32■□□□□ 0.36
RTN3-214ENST00000545432 F2P00734 622 aa17.32■□□□□ 0.36
RTN3-214ENST00000545432 DGKDQ16760 1214 aa17.32■□□□□ 0.36
RTN3-214ENST00000545432 LY6KQ17RY6 165 aa17.32■□□□□ 0.36
RTN3-214ENST00000545432 FBXO22Q8NEZ5 403 aa17.32■□□□□ 0.36
RTN3-214ENST00000545432 WNT8BQ93098 351 aa17.32■□□□□ 0.36
RTN3-214ENST00000545432 SAMD11Q96NU1 681 aa17.32■□□□□ 0.36
RTN3-214ENST00000545432 IWS1Q96ST2 819 aa17.32■□□□□ 0.36
RTN3-214ENST00000545432 C17orf80Q9BSJ5 609 aa17.32■□□□□ 0.36
RTN3-214ENST00000545432 DDX41Q9UJV9 622 aaKnown RBP17.32■□□□□ 0.36
RTN3-214ENST00000545432 ZNF318Q5VUA4 2279 aa17.32■□□□□ 0.36
RTN3-214ENST00000545432 DCXO43602 365 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 LGR5O75473 907 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 PSEN2P49810 448 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 ZNF618Q5T7W0 954 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 VPS53Q5VIR6 699 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■■■■■ 27.3
RTN3-214ENST00000545432 SYTL5Q8TDW5 730 aaPredicted RBP17.31■□□□□ 0.36
RTN3-214ENST00000545432 TBC1D5Q92609 795 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 PABPC5Q96DU9 382 aaKnown RBP17.31■□□□□ 0.36
RTN3-214ENST00000545432 FBXL18Q96ME1 805 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 KATNAL1Q9BW62 490 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 MTUS1Q9ULD2 1270 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 MTMR7Q9Y216 660 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 SIP14410 1827 aa17.31■□□□□ 0.36
RTN3-214ENST00000545432 H3BNC9 293 aa17.3■□□□□ 0.36
RTN3-214ENST00000545432 HOXC8P31273 242 aa17.3■□□□□ 0.36
RTN3-214ENST00000545432 SSTR3P32745 418 aaPredicted RBP17.3■□□□□ 0.36
RTN3-214ENST00000545432 ZP2Q05996 745 aa17.3■□□□□ 0.36
RTN3-214ENST00000545432 HIC1Q14526 733 aa17.3■□□□□ 0.36
RTN3-214ENST00000545432 C7orf31Q8N865 590 aa17.3■□□□□ 0.36
RTN3-214ENST00000545432 PPTC7Q8NI37 304 aa17.3■□□□□ 0.36
RTN3-214ENST00000545432 NSUN6Q8TEA1 469 aaKnown RBP17.3■□□□□ 0.36
RTN3-214ENST00000545432 TAAR1Q96RJ0 339 aa17.3■□□□□ 0.36
RTN3-214ENST00000545432 FSD1Q9BTV5 496 aa17.3■□□□□ 0.36
RTN3-214ENST00000545432 COL20A1Q9P218 1284 aa17.3■□□□□ 0.36
RTN3-214ENST00000545432 EMSYQ7Z589 1322 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 FGAP02671 866 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 GHRHRQ02643 423 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 LAMC2Q13753 1193 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 STXBP2Q15833 593 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 PTPROQ16827 1216 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 EPC2Q52LR7 807 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 TIGD5Q53EQ6 642 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 PLEKHG4Q58EX7 1191 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 GPATCH4Q5T3I0 446 aaKnown RBP17.29■□□□□ 0.36
RTN3-214ENST00000545432 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 TICAM2Q86XR7 235 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 DBF4BQ8NFT6 615 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 TOP1MTQ969P6 601 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 COL4A6Q14031 1691 aa17.29■□□□□ 0.36
RTN3-214ENST00000545432 ZMYM6O95789 1325 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 SALL3Q9BXA9 1300 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 PPFIA4O75335 1185 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 EIF3JO75822 258 aaKnown RBP17.28■□□□□ 0.36
RTN3-214ENST00000545432 MFSD10Q14728 455 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 KIAA0753Q2KHM9 967 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 CTC1Q2NKJ3 1217 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 SEPT14Q6ZU15 432 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 SERINC5Q86VE9 423 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 ADHFE1Q8IWW8 467 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 BANK1Q8NDB2 785 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 HELLSQ9NRZ9 838 aa17.28■□□□□ 0.36
RTN3-214ENST00000545432 H3BQ06 376 aaPredicted RBP17.27■□□□□ 0.36
RTN3-214ENST00000545432 NCK2O43639 380 aa17.27■□□□□ 0.36
RTN3-214ENST00000545432 AMHP03971 560 aa17.27■□□□□ 0.36
RTN3-214ENST00000545432 PCP11498 1178 aaKnown RBP17.27■□□□□ 0.36
RTN3-214ENST00000545432 LTBRP36941 435 aa17.27■□□□□ 0.36
RTN3-214ENST00000545432 ZNF200P98182 395 aaPredicted RBP17.27■□□□□ 0.36
RTN3-214ENST00000545432 FAM117BQ6P1L5 589 aa17.27■□□□□ 0.36
RTN3-214ENST00000545432 OTUD7AQ8TE49 926 aaPredicted RBP17.27■□□□□ 0.36
RTN3-214ENST00000545432 FAM50BQ9Y247 325 aa17.27■□□□□ 0.36
RTN3-214ENST00000545432 MYO7AQ13402 2215 aa17.27■□□□□ 0.35
RTN3-214ENST00000545432 ABCB11O95342 1321 aa17.26■□□□□ 0.35
RTN3-214ENST00000545432 RGS20O76081 388 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms