RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 RTKN2Q8IZC4 609 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 PIGSQ96S52 555 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 MMTAG2Q9BU76 263 aaKnown RBP25.88■■□□□ 1.73
FOXA1-202ENST00000545425 MTMR4Q9NYA4 1195 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 SAR1BQ9Y6B6 198 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 IGKV6D-41A0A0C4DH26 115 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 TECP42680 631 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 SLC4A8Q2Y0W8 1093 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 CC2D2BQ6DHV5 1058 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 USP17L2Q6R6M4 530 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 JAKMIP2Q96AA8 810 aa25.88■■□□□ 1.73
FOXA1-202ENST00000545425 PURBQ96QR8 312 aaKnown RBP25.88■■□□□ 1.73
FOXA1-202ENST00000545425 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.88■■□□□ 1.73
FOXA1-202ENST00000545425 HERVK_113P62684 666 aa25.87■■□□□ 1.73
FOXA1-202ENST00000545425 GABPAQ06546 454 aa25.87■■□□□ 1.73
FOXA1-202ENST00000545425 STK4Q13043 487 aa25.87■■□□□ 1.73
FOXA1-202ENST00000545425 LARP4BQ92615 738 aaKnown RBP25.87■■□□□ 1.73
FOXA1-202ENST00000545425 EXOC4Q96A65 974 aa25.87■■□□□ 1.73
FOXA1-202ENST00000545425 GUCA1BQ9UMX6 200 aa25.87■■□□□ 1.73
FOXA1-202ENST00000545425 L1RE1Q9UN81 338 aa25.87■■□□□ 1.73
FOXA1-202ENST00000545425 SLX4Q8IY92 1834 aa25.87■■□□□ 1.73
FOXA1-202ENST00000545425 A0A0U1RQJ8 604 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 PRELPP51888 382 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 MAN2A1Q16706 1144 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 MIIPQ5JXC2 388 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 KRT79Q5XKE5 535 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 ATRIPQ8WXE1 791 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 TSG101Q99816 390 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 VIPAS39Q9H9C1 493 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 PNMA6FA0A0J9YX94 578 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 USO1O60763 962 aaKnown RBP25.86■■□□□ 1.73
FOXA1-202ENST00000545425 C1QTNF8P60827 252 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 GRB10Q13322 594 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 SPA17Q15506 151 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 GRIPAP1Q4V328 841 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 GPATCH4Q5T3I0 446 aaKnown RBP25.86■■□□□ 1.73
FOXA1-202ENST00000545425 LRRC15Q8TF66 581 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 NUCKS1Q9H1E3 243 aaKnown RBP25.86■■□□□ 1.73
FOXA1-202ENST00000545425 EPC1Q9H2F5 836 aa25.86■■□□□ 1.73
FOXA1-202ENST00000545425 NHEJ1Q9H9Q4 299 aaPredicted RBP25.86■■□□□ 1.73
FOXA1-202ENST00000545425 VAV2P52735 878 aa25.85■■□□□ 1.73
FOXA1-202ENST00000545425 TMEM119Q4V9L6 283 aa25.85■■□□□ 1.73
FOXA1-202ENST00000545425 VWA3BQ502W6 1294 aa25.85■■□□□ 1.73
FOXA1-202ENST00000545425 MCTP2Q6DN12 878 aa25.85■■□□□ 1.73
FOXA1-202ENST00000545425 RAD54LQ92698 747 aa25.85■■□□□ 1.73
FOXA1-202ENST00000545425 COA1Q9GZY4 146 aa25.85■■□□□ 1.73
FOXA1-202ENST00000545425 PLAGL2Q9UPG8 496 aa25.85■■□□□ 1.73
FOXA1-202ENST00000545425 KDM3AQ9Y4C1 1321 aa25.85■■□□□ 1.73
FOXA1-202ENST00000545425 LTBP1Q14766 1721 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 ITIH3Q06033 890 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 KIF5AQ12840 1032 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 TBC1D16Q8TBP0 767 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 PLIN2Q99541 437 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 ST7Q9NRC1 585 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 BLOC1S4Q9NUP1 217 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 USP17L5A8MUK1 530 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 LCA5LO95447 670 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 TTLL1O95922 423 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 PRLRP16471 622 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 MRPL12P52815 198 aaKnown RBP25.84■■□□□ 1.73
FOXA1-202ENST00000545425 POTEDQ86YR6 584 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 KIAA0895Q8NCT3 520 aa25.84■■□□□ 1.73
FOXA1-202ENST00000545425 TRIM58Q8NG06 486 aa25.83■■□□□ 1.73
FOXA1-202ENST00000545425 PCMTD1Q96MG8 357 aaPredicted RBP25.83■■□□□ 1.73
FOXA1-202ENST00000545425 NT5C3AQ9H0P0 336 aa25.83■■□□□ 1.73
FOXA1-202ENST00000545425 TMX4Q9H1E5 349 aaPredicted RBP25.83■■□□□ 1.73
FOXA1-202ENST00000545425 ZSWIM4Q9H7M6 989 aa25.83■■□□□ 1.73
FOXA1-202ENST00000545425 MED4Q9NPJ6 270 aa25.83■■□□□ 1.73
FOXA1-202ENST00000545425 BIN2Q9UBW5 565 aaPredicted RBP25.83■■□□□ 1.73
FOXA1-202ENST00000545425 TXKP42681 527 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 USP14P54578 494 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 EHHADHQ08426 723 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 HYIQ5T013 277 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 CCDC42Q96M95 316 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 PNMA5Q96PV4 448 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 PNKPQ96T60 521 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 SEMA6BQ9H3T3 888 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 MTMR7Q9Y216 660 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 DAGLAQ9Y4D2 1042 aa25.82■■□□□ 1.72
FOXA1-202ENST00000545425 RASSF10A6NK89 507 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 ZNF543Q08ER8 600 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 CCDC70Q6NSX1 233 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 SP8Q8IXZ3 490 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 NDST4Q9H3R1 872 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 PPEF1O14829 653 aaPredicted RBP25.81■■□□□ 1.72
FOXA1-202ENST00000545425 GNA14O95837 355 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 CLK2P49760 499 aaKnown RBP25.81■■□□□ 1.72
FOXA1-202ENST00000545425 CCDC155Q8N6L0 562 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 CUL5Q93034 780 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 BMP2KQ9NSY1 1161 aaPredicted RBP25.81■■□□□ 1.72
FOXA1-202ENST00000545425 AGPAT5Q9NUQ2 364 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 SIK3Q9Y2K2 1263 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 STK24Q9Y6E0 443 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 SBF1O95248 1867 aa25.81■■□□□ 1.72
FOXA1-202ENST00000545425 MYMKA6NI61 221 aa25.8■■□□□ 1.72
FOXA1-202ENST00000545425 KIF3CO14782 793 aa25.8■■□□□ 1.72
FOXA1-202ENST00000545425 FCER1AP12319 257 aa25.8■■□□□ 1.72
FOXA1-202ENST00000545425 DPY19L2Q6NUT2 758 aa25.8■■□□□ 1.72
FOXA1-202ENST00000545425 ZNF572Q7Z3I7 529 aaPredicted RBP25.8■■□□□ 1.72
FOXA1-202ENST00000545425 SECISBP2LQ93073 1101 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms