RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 PNMA1Q8ND90 353 aa21.74■■□□□ 1.07
BPTF-208ENST00000544778 RPS8P62241 208 aaKnown RBP21.74■■□□□ 1.07
BPTF-208ENST00000544778 LMNB2Q03252 620 aa21.74■■□□□ 1.07
BPTF-208ENST00000544778 AOC3Q16853 763 aa21.74■■□□□ 1.07
BPTF-208ENST00000544778 LARSQ9P2J5 1176 aaKnown RBP21.74■■□□□ 1.07
BPTF-208ENST00000544778 TRPM2O94759 1503 aa21.74■■□□□ 1.07
BPTF-208ENST00000544778 FRA10AC1Q70Z53 315 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 ZNF467Q7Z7K2 595 aaPredicted RBP21.73■■□□□ 1.07
BPTF-208ENST00000544778 EIF2AQ9BY44 585 aaKnown RBP21.73■■□□□ 1.07
BPTF-208ENST00000544778 ZBTB40Q9NUA8 1239 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 MSH2P43246 934 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 THEGQ9P2T0 379 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 CCND2P30279 289 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 ARL4AP40617 200 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 GLE1Q53GS7 698 aaKnown RBP21.73■■□□□ 1.07
BPTF-208ENST00000544778 EEPD1Q7L9B9 569 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 LLGL1Q15334 1064 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 RNF219Q5W0B1 726 aaPredicted RBP21.73■■□□□ 1.07
BPTF-208ENST00000544778 SLFN13Q68D06 897 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 KCTD1Q719H9 257 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 LZICQ8WZA0 190 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 NXF1Q9UBU9 619 aaKnown RBP21.73■■□□□ 1.07
BPTF-208ENST00000544778 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 RWDD4Q6NW29 188 aaKnown RBP21.73■■□□□ 1.07
BPTF-208ENST00000544778 KRT27Q7Z3Y8 459 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 PCIF1Q9H4Z3 704 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 SBNO1A3KN83 1393 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 TMEM247A6NEH6 219 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 MAGOHBQ96A72 148 aaKnown RBP21.73■■□□□ 1.07
BPTF-208ENST00000544778 EEF2KMTQ96G04 330 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 NT5C1BQ96P26 610 aa21.73■■□□□ 1.07
BPTF-208ENST00000544778 PFDN1O60925 122 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 EHHADHQ08426 723 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 LGR6Q9HBX8 967 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 BCAMP50895 628 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 BASP1P80723 227 aaKnown RBP21.72■■□□□ 1.07
BPTF-208ENST00000544778 GUCY2DQ02846 1103 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 KIF19Q2TAC6 998 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 DNAJC10Q8IXB1 793 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
BPTF-208ENST00000544778 HSPA8P11142 646 aaKnown RBP21.72■■□□□ 1.07
BPTF-208ENST00000544778 MARK3P27448 753 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 EEF1DP29692 281 aaKnown RBP21.72■■□□□ 1.07
BPTF-208ENST00000544778 ELMSAN1Q6PJG2 1045 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 CUL7Q14999 1698 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 LRRN2O75325 713 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 RPSAP08865 295 aaKnown RBP21.72■■□□□ 1.07
BPTF-208ENST00000544778 CCDC51Q96ER9 411 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 CALN1Q9BXU9 219 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 PFKFB1P16118 471 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 MAP2K2P36507 400 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
BPTF-208ENST00000544778 F8W8V4 182 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 KRT1P04264 644 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 RUNDC3BQ96NL0 473 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 SIX6OS1Q8N1H7 587 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 ESRRGP62508 458 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 KCTD16Q68DU8 428 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 EXOC8Q8IYI6 725 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 PCDHA1Q9Y5I3 950 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 MED7O43513 233 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 CAPRIN1Q14444 709 aaKnown RBP21.71■■□□□ 1.07
BPTF-208ENST00000544778 ADALQ6DHV7 355 aa21.71■■□□□ 1.07
BPTF-208ENST00000544778 CFLARO15519 480 aa21.7■■□□□ 1.07
BPTF-208ENST00000544778 BPIFB4P59827 614 aa21.7■■□□□ 1.07
BPTF-208ENST00000544778 ATP6V0A1Q93050 837 aa21.7■■□□□ 1.07
BPTF-208ENST00000544778 TBK1Q9UHD2 729 aa21.7■■□□□ 1.07
BPTF-208ENST00000544778 CYP4F22Q6NT55 531 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 NACC1Q96RE7 527 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 FTOQ9C0B1 505 aaKnown RBP eCLIP21.7■■□□□ 1.06
BPTF-208ENST00000544778 INTUQ9ULD6 942 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 WDR91A4D1P6 747 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 IFNL3Q8IZI9 196 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 PCGF5Q86SE9 256 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 SLC7A3Q8WY07 619 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 EFHD1Q9BUP0 239 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 SUN1O94901 812 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 SGO2Q562F6 1265 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 KLC3Q6P597 504 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 ARMC9Q7Z3E5 817 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 HSPH1Q92598 858 aa21.7■■□□□ 1.06
BPTF-208ENST00000544778 HEXIM2Q96MH2 286 aaKnown RBP21.7■■□□□ 1.06
BPTF-208ENST00000544778 TTI1O43156 1089 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 SEC24BO95487 1268 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 SNCBQ16143 134 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 NOSTRINQ8IVI9 506 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 COG4Q9H9E3 785 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 MYO1EQ12965 1108 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 ATG16L1Q676U5 607 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 SCARA5Q6ZMJ2 495 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 ELMOD1Q8N336 334 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 INTS9Q9NV88 658 aaKnown RBP21.69■■□□□ 1.06
BPTF-208ENST00000544778 MAP3K7O43318 606 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 KCNA1Q09470 495 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 ZKSCAN8Q15776 578 aaPredicted RBP21.69■■□□□ 1.06
BPTF-208ENST00000544778 SPZ1Q9BXG8 430 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 OCRLQ01968 901 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 TRIM37O94972 964 aa21.69■■□□□ 1.06
BPTF-208ENST00000544778 H2AFZP0C0S5 128 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms