RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 BMP3P12645 472 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 CSF2RAP15509 400 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 PBX2P40425 430 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 SLC4A3P48751 1232 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 TOB2Q14106 344 aaPredicted RBP7.63□□□□□ -1.19
CDCA3-209ENST00000544610 GNASQ5JWF2 1037 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 TMEM240Q5SV17 173 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 PSRC1Q6PGN9 363 aaPredicted RBP7.63□□□□□ -1.19
CDCA3-209ENST00000544610 ZNF444Q8N0Y2 327 aaPredicted RBP7.63□□□□□ -1.19
CDCA3-209ENST00000544610 LRRC47Q8N1G4 583 aaKnown RBP7.63□□□□□ -1.19
CDCA3-209ENST00000544610 TMEM199Q8N511 208 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 FAM133AQ8N9E0 248 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 NEDD1Q8NHV4 660 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 DDX12PQ92771 950 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 TMX3Q96JJ7 454 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 UBAC1Q9BSL1 405 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 PBX4Q9BYU1 374 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 PRDM6Q9NQX0 595 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 ZSWIM5Q9P217 1185 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 KIF3AQ9Y496 699 aa7.63□□□□□ -1.19
CDCA3-209ENST00000544610 CTDP1Q9Y5B0 961 aaPredicted RBP7.63□□□□□ -1.19
CDCA3-209ENST00000544610 ASTN1O14525 1302 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 ZNF536O15090 1300 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.62□□□□□ -1.19
CDCA3-209ENST00000544610 C2orf72A6NCS6 295 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 SH2B2O14492 632 aaPredicted RBP7.62□□□□□ -1.19
CDCA3-209ENST00000544610 TLR3O15455 904 aaKnown RBP7.62□□□□□ -1.19
CDCA3-209ENST00000544610 PFKFB2O60825 505 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 DDAH1O94760 285 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 SMARCA1P28370 1054 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 STAT2P52630 851 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 AK2P54819 239 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 HAND2P61296 217 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 HMGN5P82970 282 aaKnown RBP7.62□□□□□ -1.19
CDCA3-209ENST00000544610 FGD1P98174 961 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 CNTN2Q02246 1040 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 MCM6Q14566 821 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 SEC23AQ15436 765 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 TJAP1Q5JTD0 557 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 SLFN13Q68D06 897 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 RCSD1Q6JBY9 416 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 TEX2Q8IWB9 1127 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 SLC43A3Q8NBI5 491 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 GMCL1Q96IK5 515 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 PPP1R12CQ9BZL4 782 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 ACAD9Q9H845 621 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 A1CFQ9NQ94 594 aaKnown RBP7.62□□□□□ -1.19
CDCA3-209ENST00000544610 HOMER2Q9NSB8 354 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 GNEQ9Y223 722 aaKnown RBP7.62□□□□□ -1.19
CDCA3-209ENST00000544610 TAF6LQ9Y6J9 622 aa7.62□□□□□ -1.19
CDCA3-209ENST00000544610 SMCHD1A6NHR9 2005 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 NEDD4P46934 1319 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 CHD7Q9P2D1 2997 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 MYH4Q9Y623 1939 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 SOWAHBA6NEL2 793 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 ASB14A6NK59 587 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 TSPY2A6NKD2 308 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 GRXCR1A8MXD5 290 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 B4E1Z4 1266 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 TMEM232C9JQI7 657 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 IFIT3O14879 490 aaKnown RBP7.61□□□□□ -1.19
CDCA3-209ENST00000544610 PLA2G6O60733 806 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 KDM4AO75164 1064 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 CABYRO75952 493 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 CDKL5O76039 1030 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 TSPY3P0CV98 308 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 TSPY8P0CW00 308 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 ACRP10323 421 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 PDCP20941 246 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 DDIT3P35638 169 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 ANTXR2P58335 489 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 BEX3Q00994 111 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 TNFAIP2Q03169 654 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 CTDSPL2Q05D32 466 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 TKFCQ3LXA3 575 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 CPLX2Q6PUV4 134 aaKnown RBP7.61□□□□□ -1.19
CDCA3-209ENST00000544610 SYNE3Q6ZMZ3 975 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 Q6ZUG5 572 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 ZNF365Q70YC5 407 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 TLK2Q86UE8 772 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 FAM160B2Q86V87 743 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 HERVK_113Q902F9 699 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 VTI1AQ96AJ9 217 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 AGBL1Q96MI9 1066 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 ZSCAN10Q96SZ4 725 aaPredicted RBP7.61□□□□□ -1.19
CDCA3-209ENST00000544610 GAS2L1Q99501 681 aaPredicted RBP7.61□□□□□ -1.19
CDCA3-209ENST00000544610 SEZ6LQ9BYH1 1024 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 LY9Q9HBG7 655 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 IL23AQ9NPF7 189 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 RNF146Q9NTX7 359 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 REV3LO60673 3130 aa7.61□□□□□ -1.19
CDCA3-209ENST00000544610 GRIN2DO15399 1336 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 TNFRSF10AO00220 468 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 RANBP6O60518 1105 aaKnown RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 CD2BP2O95400 341 aaKnown RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 HSP90AA1P07900 732 aaKnown RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 SMPD1P17405 629 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 PDIA3P30101 505 aaKnown RBP7.6□□□□□ -1.19
CDCA3-209ENST00000544610 KIF5BP33176 963 aa7.6□□□□□ -1.19
CDCA3-209ENST00000544610 CYP2C18P33260 490 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms