RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TAAR1Q96RJ0 339 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 TGS1Q96RS0 853 aaKnown RBP11.19□□□□□ -0.62
C2CD3-220ENST00000544293 CPVLQ9H3G5 476 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 TCP11L1Q9NUJ3 509 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 HDAC6Q9UBN7 1215 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 GTF2IRD1Q9UHL9 959 aa11.19□□□□□ -0.62
C2CD3-220ENST00000544293 SCN5AQ14524 2016 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 LCTP09848 1927 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 ABHD14A-ACY1A0A1B0GW23 586 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 RANBP6O60518 1105 aaKnown RBP11.18□□□□□ -0.62
C2CD3-220ENST00000544293 LGR5O75473 907 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 SLC3A2P08195 630 aaKnown RBP11.18□□□□□ -0.62
C2CD3-220ENST00000544293 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
C2CD3-220ENST00000544293 KCNJ6P48051 423 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 MRE11P49959 708 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 CHMP4BP1P59074 171 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 HTRA4P83105 476 aaPredicted RBP11.18□□□□□ -0.62
C2CD3-220ENST00000544293 ZNF543Q08ER8 600 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 ZNF618Q5T7W0 954 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 PTCRAQ6ISU1 281 aaPredicted RBP11.18□□□□□ -0.62
C2CD3-220ENST00000544293 FAM117BQ6P1L5 589 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 RGS22Q8NE09 1264 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 SP7Q8TDD2 431 aaPredicted RBP11.18□□□□□ -0.62
C2CD3-220ENST00000544293 SYTL5Q8TDW5 730 aaPredicted RBP11.18□□□□□ -0.62
C2CD3-220ENST00000544293 FBXL18Q96ME1 805 aa11.18□□□□□ -0.62
C2CD3-220ENST00000544293 DDX41Q9UJV9 622 aaKnown RBP11.18□□□□□ -0.62
C2CD3-220ENST00000544293 WDR19Q8NEZ3 1342 aa11.17□□□□□ -0.62
C2CD3-220ENST00000544293 SALL3Q9BXA9 1300 aa11.17□□□□□ -0.62
C2CD3-220ENST00000544293 H3BQ06 376 aaPredicted RBP11.17□□□□□ -0.62
C2CD3-220ENST00000544293 FGAP02671 866 aa11.17□□□□□ -0.62
C2CD3-220ENST00000544293 LTBRP36941 435 aa11.17□□□□□ -0.62
C2CD3-220ENST00000544293 NHLH1Q02575 133 aa11.17□□□□□ -0.62
C2CD3-220ENST00000544293 ALX1Q15699 326 aa11.17□□□□□ -0.62
C2CD3-220ENST00000544293 PPP4R3BQ5MIZ7 849 aa11.17□□□□□ -0.62
C2CD3-220ENST00000544293 SEPT14Q6ZU15 432 aa11.17□□□□□ -0.62
C2CD3-220ENST00000544293 ZBED2Q9BTP6 218 aa11.17□□□□□ -0.62
C2CD3-220ENST00000544293 RGS20O76081 388 aa11.16□□□□□ -0.62
C2CD3-220ENST00000544293 GH1P01241 217 aa11.16□□□□□ -0.62
C2CD3-220ENST00000544293 LINC00271P0C7V0 271 aa11.16□□□□□ -0.62
C2CD3-220ENST00000544293 GOLGA8HP0CJ92 632 aa11.16□□□□□ -0.62
C2CD3-220ENST00000544293 HOXD8P13378 290 aaPredicted RBP11.16□□□□□ -0.62
C2CD3-220ENST00000544293 PSEN2P49810 448 aa11.16□□□□□ -0.62
C2CD3-220ENST00000544293 BRDTQ58F21 947 aaPredicted RBP11.16□□□□□ -0.62
C2CD3-220ENST00000544293 MIER1Q8N108 512 aa11.16□□□□□ -0.62
C2CD3-220ENST00000544293 DBF4BQ8NFT6 615 aa11.16□□□□□ -0.62
C2CD3-220ENST00000544293 UBA5Q9GZZ9 404 aa11.16□□□□□ -0.62
C2CD3-220ENST00000544293 NOD1Q9Y239 953 aa11.16□□□□□ -0.62
C2CD3-220ENST00000544293 MYH8P13535 1937 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 TTC41PQ6P2S7 1318 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 OPLAHO14841 1288 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 PARNO95453 639 aaKnown RBP11.15□□□□□ -0.62
C2CD3-220ENST00000544293 F2P00734 622 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 ALADP13716 330 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 CASTP20810 708 aaKnown RBP11.15□□□□□ -0.62
C2CD3-220ENST00000544293 ZP2Q05996 745 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 PTK7Q13308 1070 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 IKBKEQ14164 716 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 EPC2Q52LR7 807 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 TCEAL5Q5H9L2 206 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 CHST3Q7LGC8 479 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 EMID1Q96A84 441 aaPredicted RBP11.15□□□□□ -0.62
C2CD3-220ENST00000544293 MRPL38Q96DV4 380 aaKnown RBP11.15□□□□□ -0.62
C2CD3-220ENST00000544293 PHOX2BQ99453 314 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 ALG1Q9BT22 464 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 FSD1Q9BTV5 496 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 BCAS3Q9H6U6 928 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 INSL6Q9Y581 213 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 PCDHB15Q9Y5E8 787 aa11.15□□□□□ -0.62
C2CD3-220ENST00000544293 RAD50Q92878 1312 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.14□□□□□ -0.63
C2CD3-220ENST00000544293 H3BNC9 293 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 DCXO43602 365 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 HOXC8P31273 242 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 SSTR3P32745 418 aaPredicted RBP11.14□□□□□ -0.63
C2CD3-220ENST00000544293 VASPP50552 380 aaPredicted RBP11.14□□□□□ -0.63
C2CD3-220ENST00000544293 SP2Q02086 613 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 DLX2Q07687 328 aaPredicted RBP11.14□□□□□ -0.63
C2CD3-220ENST00000544293 MFSD10Q14728 455 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 KIAA0753Q2KHM9 967 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 CTC1Q2NKJ3 1217 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 USH1GQ495M9 461 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 PLEKHG4Q58EX7 1191 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 HFE2Q6ZVN8 426 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 FBXO22Q8NEZ5 403 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 TOP1MTQ969P6 601 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 TTC14Q96N46 770 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 C16orf70Q9BSU1 422 aa11.14□□□□□ -0.63
C2CD3-220ENST00000544293 ZNF286BP0CG31 522 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 IRS1P35568 1242 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 DGKDQ16760 1214 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 HSDL1Q3SXM5 330 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 RRP12Q5JTH9 1297 aaKnown RBP11.13□□□□□ -0.63
C2CD3-220ENST00000544293 MYSM1Q5VVJ2 828 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 ZNF589Q86UQ0 364 aaPredicted RBP11.13□□□□□ -0.63
C2CD3-220ENST00000544293 SERINC5Q86VE9 423 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 TBC1D10CQ8IV04 446 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 CCDC155Q8N6L0 562 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 C7orf31Q8N865 590 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 BANK1Q8NDB2 785 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms