RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 C2CD5Q86YS7 1000 aa17.59■□□□□ 0.41
SNRNP70-203ENST00000544278 MYH1P12882 1939 aa17.58■□□□□ 0.41
SNRNP70-203ENST00000544278 TCP10L2B9ZVM9 353 aa17.58■□□□□ 0.41
SNRNP70-203ENST00000544278 CCNE1P24864 410 aa17.58■□□□□ 0.41
SNRNP70-203ENST00000544278 TSR1Q2NL82 804 aaKnown RBP17.58■□□□□ 0.41
SNRNP70-203ENST00000544278 TMTC1Q8IUR5 882 aa17.58■□□□□ 0.41
SNRNP70-203ENST00000544278 SP8Q8IXZ3 490 aa17.58■□□□□ 0.41
SNRNP70-203ENST00000544278 BCS1LQ9Y276 419 aa17.58■□□□□ 0.41
SNRNP70-203ENST00000544278 LRRC10BA6NIK2 292 aa17.58■□□□□ 0.4
SNRNP70-203ENST00000544278 PSMC6P62333 389 aa17.58■□□□□ 0.4
SNRNP70-203ENST00000544278 KRT79Q5XKE5 535 aa17.58■□□□□ 0.4
SNRNP70-203ENST00000544278 SLF2Q8IX21 1173 aa17.58■□□□□ 0.4
SNRNP70-203ENST00000544278 ZNF507Q8TCN5 953 aa17.58■□□□□ 0.4
SNRNP70-203ENST00000544278 COA1Q9GZY4 146 aa17.58■□□□□ 0.4
SNRNP70-203ENST00000544278 MLXIPQ9HAP2 919 aa17.58■□□□□ 0.4
SNRNP70-203ENST00000544278 PKD2L1Q9P0L9 805 aa17.58■□□□□ 0.4
SNRNP70-203ENST00000544278 NAV1Q8NEY1 1877 aa17.58■□□□□ 0.4
SNRNP70-203ENST00000544278 HNRNPH2P55795 449 aaKnown RBP17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 PPARDQ03181 441 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 RRP1BQ14684 758 aaKnown RBP17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 CHMP2AO43633 222 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 MIIPQ5JXC2 388 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 MTMR9Q96QG7 549 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 PCDHA12Q9UN75 941 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 HLA-DOAP06340 250 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 HOXA10P31260 410 aaPredicted RBP17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 PABPC4Q13310 644 aaKnown RBP eCLIP17.57■□□□□ 0.44e-9■■■□□ 19.1
SNRNP70-203ENST00000544278 CERKLQ49MI3 558 aaPredicted RBP17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 TBC1D10BQ4KMP7 808 aaPredicted RBP17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 SLFN13Q68D06 897 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 CRAMP1Q96RY5 1269 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 LZTS2Q9BRK4 669 aa17.57■□□□□ 0.4
SNRNP70-203ENST00000544278 TRAF5O00463 557 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 ZBTB39O15060 712 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 TBC1D8O95759 1140 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 ECE1P42892 770 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 TMEM266Q2M3C6 531 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 CC2D1AQ6P1N0 951 aaPredicted RBP17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 RRAGAQ7L523 313 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 GOLGA1Q92805 767 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 ZBTB12Q9Y330 459 aaPredicted RBP17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 GH2P01242 217 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 KRT18P05783 430 aaKnown RBP17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 RNASE9P60153 205 aaKnown RBP17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 CDC37Q16543 378 aaPredicted RBP17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 NAPGQ99747 312 aaPredicted RBP17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 NHEJ1Q9H9Q4 299 aaPredicted RBP17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 FAM198AQ9UFP1 575 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 CDC23Q9UJX2 597 aa17.56■□□□□ 0.4
SNRNP70-203ENST00000544278 PNMA6FA0A0J9YX94 578 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 GOLGA6L9A6NEM1 432 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 ZNF263O14978 683 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 N4BP1O75113 896 aaKnown RBP17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 ADRA2BP18089 450 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 SKIDA1Q1XH10 827 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 MIGA2Q7L4E1 593 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 NEK11Q8NG66 645 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 CCDC47Q96A33 483 aaKnown RBP17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 TMX4Q9H1E5 349 aaPredicted RBP17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 ARGLU1Q9NWB6 273 aaPredicted RBP17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 TAF1LQ8IZX4 1826 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 COL24A1Q17RW2 1714 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 DLEC1Q9Y238 1755 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 RAD17O75943 681 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 BMS1Q14692 1282 aaKnown RBP17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 FAM163AQ96GL9 167 aaPredicted RBP17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 SH2D3AQ9BRG2 576 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 ANKZF1Q9H8Y5 726 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 NCK2O43639 380 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 BUB1O43683 1085 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 VSNL1P62760 191 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 KCNB1Q14721 858 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 RSRC2Q7L4I2 434 aaKnown RBP17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 CUL5Q93034 780 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 MMS19Q96T76 1030 aa17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
SNRNP70-203ENST00000544278 ZBTB5O15062 677 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 ECE2O60344 883 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 ICA1Q05084 483 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 ASPRV1Q53RT3 343 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 HERC4Q5GLZ8 1057 aaPredicted RBP17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 GALNT17Q6IS24 598 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 CCDC174Q6PII3 467 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 C15orf52Q6ZUT6 534 aaKnown RBP17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 SRGAP1Q7Z6B7 1085 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 KSR1Q8IVT5 923 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 JAKMIP2Q96AA8 810 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 PRMT6Q96LA8 375 aaPredicted RBP17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 JADE2Q9NQC1 790 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 C21orf2O43822 256 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 CASP5P51878 434 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 NAP1L1P55209 391 aaKnown RBP17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 SIAH1Q8IUQ4 282 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 RAD54LQ92698 747 aa17.54■□□□□ 0.4
SNRNP70-203ENST00000544278 MYH10P35580 1976 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 RSPH10B2B2RC85 870 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 MED24O75448 989 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 RSPH10BP0C881 870 aa17.53■□□□□ 0.4
SNRNP70-203ENST00000544278 PRPHP41219 470 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms