RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 ADCY7P51828 1080 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 ANAPC15P60006 121 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 PSMC6P62333 389 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
DDB1-222ENST00000543627 TLE2Q04725 743 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 SSRP1Q08945 709 aaKnown RBP12.69□□□□□ -0.38
DDB1-222ENST00000543627 CPLX2Q6PUV4 134 aaKnown RBP12.69□□□□□ -0.38
DDB1-222ENST00000543627 VSIG10LQ86VR7 867 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 DHX37Q8IY37 1157 aaKnown RBP12.69□□□□□ -0.38
DDB1-222ENST00000543627 AGXT2Q9BYV1 514 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 UPF3AQ9H1J1 476 aaKnown RBP12.69□□□□□ -0.38
DDB1-222ENST00000543627 TMEM260Q9NX78 707 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 PCDHA6Q9UN73 950 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 PCDHA8Q9Y5H6 950 aa12.69□□□□□ -0.38
DDB1-222ENST00000543627 RBM47A0AV96 593 aaKnown RBP12.68□□□□□ -0.38
DDB1-222ENST00000543627 STXBP3O00186 592 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 NKRFO15226 690 aaKnown RBP eCLIP12.68□□□□□ -0.38
DDB1-222ENST00000543627 GH1P01241 217 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 SCG2P13521 617 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 CPT1AP50416 773 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 RCAN1P53805 252 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 AK2P54819 239 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 FUT2Q10981 343 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 PFKFB3Q16875 520 aaPredicted RBP12.68□□□□□ -0.38
DDB1-222ENST00000543627 C8orf34Q49A92 452 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 FAM47CQ5HY64 1035 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 JAKMIP3Q5VZ66 844 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 CCSAPQ6IQ19 270 aaPredicted RBP12.68□□□□□ -0.38
DDB1-222ENST00000543627 TRIM22Q8IYM9 498 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 AFG1LQ8WV93 481 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 ZNF274Q96GC6 653 aaPredicted RBP12.68□□□□□ -0.38
DDB1-222ENST00000543627 LBHD1Q9BQE6 289 aaPredicted RBP12.68□□□□□ -0.38
DDB1-222ENST00000543627 MLXIPQ9HAP2 919 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 BARHL2Q9NY43 387 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 PKD2L1Q9P0L9 805 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 COLQQ9Y215 455 aaPredicted RBP12.68□□□□□ -0.38
DDB1-222ENST00000543627 Q9Y3F1 56 aa12.68□□□□□ -0.38
DDB1-222ENST00000543627 A0A0U1RQG5 324 aaPredicted RBP12.67□□□□□ -0.38
DDB1-222ENST00000543627 DCDC2CA8MYV0 355 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 CTAGE5O15320 804 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 PRPF3O43395 683 aaKnown RBP12.67□□□□□ -0.38
DDB1-222ENST00000543627 SP4Q02446 784 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 ANKRD1Q15327 319 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 GNPTABQ3T906 1256 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 TYW1BQ6NUM6 668 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 FBXL16Q8N461 479 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 NECAB1Q8N987 351 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 EHMT1Q9H9B1 1298 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 C6orf50Q9HD87 102 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 TMEM39AQ9NV64 488 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 POLR3EQ9NVU0 708 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 VPS54Q9P1Q0 977 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 DDX41Q9UJV9 622 aaKnown RBP12.67□□□□□ -0.38
DDB1-222ENST00000543627 TPCN1Q9ULQ1 816 aa12.67□□□□□ -0.38
DDB1-222ENST00000543627 ARVCFO00192 962 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 PIK3CDO00329 1044 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 GGPS1O95749 300 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 CST5P28325 142 aaPredicted RBP12.66□□□□□ -0.38
DDB1-222ENST00000543627 ZNF76P36508 570 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 NLRP5P59047 1200 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 MRPS9P82933 396 aaKnown RBP12.66□□□□□ -0.38
DDB1-222ENST00000543627 GHRHRQ02643 423 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 ITGA7Q13683 1181 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 CCDC62Q6P9F0 684 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 SH3RF1Q7Z6J0 888 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 NLRX1Q86UT6 975 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 CCDC12Q8WUD4 166 aaPredicted RBP12.66□□□□□ -0.38
DDB1-222ENST00000543627 C22orf23Q9BZE7 217 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 UPF2Q9HAU5 1272 aaKnown RBP12.66□□□□□ -0.38
DDB1-222ENST00000543627 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
DDB1-222ENST00000543627 NOP56O00567 594 aaKnown RBP12.65□□□□□ -0.38
DDB1-222ENST00000543627 TLR3O15455 904 aaKnown RBP12.65□□□□□ -0.38
DDB1-222ENST00000543627 CABYRO75952 493 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 RGS20O76081 388 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 CLTBP09497 229 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 IFNAR1P17181 557 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 MAGEA10P43363 369 aaPredicted RBP12.65□□□□□ -0.38
DDB1-222ENST00000543627 EVCP57679 992 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 SP2Q02086 613 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 SCRN1Q12765 414 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 LAMC2Q13753 1193 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 NTRK3Q16288 839 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 PKN1Q16512 942 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 PCNX4Q63HM2 1172 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 PPP1R18Q6NYC8 613 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 KCNV1Q6PIU1 500 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 SPATA33Q96N06 139 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 UIMC1Q96RL1 719 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 MTG1Q9BT17 334 aaPredicted RBP12.65□□□□□ -0.38
DDB1-222ENST00000543627 ALG1Q9BT22 464 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
DDB1-222ENST00000543627 UBE2OQ9C0C9 1292 aaKnown RBP12.65□□□□□ -0.38
DDB1-222ENST00000543627 BCAS3Q9H6U6 928 aa12.65□□□□□ -0.38
DDB1-222ENST00000543627 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
DDB1-222ENST00000543627 ELP1O95163 1332 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 ALPK3Q96L96 1907 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 hCG_1984214I3L0E3 225 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 MMP3P08254 477 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 RAG1P15918 1043 aa12.64□□□□□ -0.39
DDB1-222ENST00000543627 FOSBP53539 338 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms