RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MYO1AQ9UBC5 1043 aa7.56□□□□□ -1.2
SRGAP1-206ENST00000543397 CSPG5O95196 566 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 CYP2D6P10635 497 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 UBE2SQ16763 222 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 FAM84BQ96KN1 310 aaPredicted RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 DCP1AQ9NPI6 582 aaPredicted RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 RNF146Q9NTX7 359 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 MTMR6Q9Y217 621 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 SLC4A7Q9Y6M7 1214 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 TNPO2O14787 897 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 PRPF3O43395 683 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 MYL3P08590 195 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 POLR2BP30876 1174 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 ELMSAN1Q6PJG2 1045 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 MICALCLQ6ZW33 695 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 RSRC2Q7L4I2 434 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 GSDMBQ8TAX9 411 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 LSM14BQ9BX40 385 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 FAM107BQ9H098 131 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 RAVER2Q9HCJ3 691 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 KIAA1468Q9P260 1216 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 ODF2LQ9ULJ1 636 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 ARHGEF40Q8TER5 1519 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 CDC42BPBQ9Y5S2 1711 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 MFSD14CQ5VZR4 134 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 CEP128Q6ZU80 1094 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 MSL3Q8N5Y2 521 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 TRIML1Q8N9V2 468 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 ANKRD36BP1Q96IX9 119 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 CLIC6Q96NY7 704 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 TLDC2A0PJX2 215 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 RPN1P04843 607 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 MARK3P27448 753 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 PIK3CAP42336 1068 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 SNAP25P60880 206 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 AP3B2Q13367 1082 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 SF3B3Q15393 1217 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 NSUN6Q8TEA1 469 aaKnown RBP7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 TBC1D31Q96DN5 1066 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 PRIMPOLQ96LW4 560 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 RABL2BQ9UNT1 228 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 TRPM1Q7Z4N2 1603 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 RGS12O14924 1447 aa7.55□□□□□ -1.2
SRGAP1-206ENST00000543397 ACTN4O43707 911 aaKnown RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 CAMTA2O94983 1202 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 OATP04181 439 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 FDX1P10109 184 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 COPB2P35606 906 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 PDE6CP51160 858 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 PPP2R5DQ14738 602 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 TAF1CQ15572 869 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 SCYL2Q6P3W7 929 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 SYCE1Q8N0S2 351 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 GIMAP8Q8ND71 665 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 CACTINQ8WUQ7 758 aaKnown RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 CD163L1Q9NR16 1453 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 ZBTB5O15062 677 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 FCER1AP12319 257 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 PTPREP23469 700 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 SLC44A5Q8NCS7 719 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 NSUN7Q8NE18 718 aaKnown RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 STAG1Q8WVM7 1258 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 TMEM47Q9BQJ4 181 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 CBX8Q9HC52 389 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 ANAPC4Q9UJX5 808 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 IQSEC2Q5JU85 1478 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 CROCC2H7BZ55 1655 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 TYW5A2RUC4 315 aaKnown RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 SMIM23A6NLE4 172 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 KCNJ18B7U540 433 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 SLU7O95391 586 aaKnown RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 DPEP1P16444 411 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 KCNJ12Q14500 433 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 RCSD1Q6JBY9 416 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 SYT10Q6XYQ8 523 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 TRIM50Q86XT4 487 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 CCDC89Q8N998 374 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 RAET1EQ8TD07 263 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 NLRP4Q96MN2 994 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 ACCSQ96QU6 501 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 FTOQ9C0B1 505 aaKnown RBP eCLIP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 PCDHA7Q9UN72 937 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 CNTNAP4Q9C0A0 1308 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 ADAMTS13Q76LX8 1427 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 OPA1O60313 960 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 MMP1P03956 469 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 ZNF157P51786 506 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 MORC3Q14149 939 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 MCM6Q14566 821 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 UAP1Q16222 522 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 CATSPER4Q7RTX7 472 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 FAM167AQ96KS9 214 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 DISC1Q9NRI5 854 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 STK17AQ9UEE5 414 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 F5H6K3 240 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 GADD45BO75293 160 aaPredicted RBP7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 KLRC3Q07444 240 aa7.54□□□□□ -1.2
SRGAP1-206ENST00000543397 MTMR1Q13613 665 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms