RNA–Protein interactions for RNA: ENST00000543341.6

GTF2H3-212, Transcript of general transcription factor IIH subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2H3, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-212ENST00000543341 CCDC144CPQ8IYA2 1237 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 CMTR1Q8N1G2 835 aaKnown RBP8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 DNAJC5GQ8N7S2 189 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 ALG1Q9BT22 464 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 KATNBL1Q9H079 304 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 TXNRD2Q9NNW7 524 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 FBXO28Q9NVF7 368 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 BRD2P25440 801 aaKnown RBP8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 SREBF1P36956 1147 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 TRAF1Q13077 416 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 MORN1Q5T089 497 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 PPP4R3AQ6IN85 833 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 NIPA1Q7RTP0 329 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 TMC6Q7Z403 805 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 C8orf76Q96K31 380 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 AMNQ9BXJ7 453 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 SLC26A6Q9BXS9 759 aa8.3□□□□□ -1.08
GTF2H3-212ENST00000543341 IGLV3-22A0A075B6J6 115 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 CTAGE5O15320 804 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 SLFN14P0C7P3 912 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 MAP2K2P36507 400 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 GSDMDP57764 484 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 HERVK_113P62684 666 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 KMT5BQ4FZB7 885 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 FBXO38Q6PIJ6 1188 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 CHST13Q8NET6 341 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 OTUD5Q96G74 571 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 RBM47A0AV96 593 aaKnown RBP8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 TRIM75PA6NK02 468 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 WNT7AO00755 349 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 GCLCP48506 637 aaPredicted RBP8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 FAM110CQ1W6H9 321 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 Q4G0T1 1027 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 NOSTRINQ8IVI9 506 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 TRIM22Q8IYM9 498 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 CCDC148Q8NFR7 591 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 OXER1Q8TDS5 423 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 ATG4CQ96DT6 458 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 SLC10A4Q96EP9 437 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 UBA5Q9GZZ9 404 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 CPVLQ9H3G5 476 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 GOLPH3LQ9H4A5 285 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 TOMM22Q9NS69 142 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 RTEL1Q9NZ71 1219 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 RIPK3Q9Y572 518 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 HOXC6P09630 235 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 CALML3P27482 149 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 SLC16A2P36021 539 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 GRB14Q14449 540 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 MRPS27Q92552 414 aaKnown RBP8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 MTMR9Q96QG7 549 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 TSPYL1Q9H0U9 437 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 GJB4Q9NTQ9 266 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 CWC15Q9P013 229 aaKnown RBP8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 COL20A1Q9P218 1284 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 DNAI1Q9UI46 699 aa8.29□□□□□ -1.08
GTF2H3-212ENST00000543341 SLC25A27O95847 323 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 FAM160A1Q05DH4 1040 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 PABPC4Q13310 644 aaKnown RBP eCLIP8.28□□□□□ -1.084e-7■■□□□ 12.4
GTF2H3-212ENST00000543341 MUM1L1Q5H9M0 696 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 MAMDC4Q6UXC1 1216 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 FAM133AQ8N9E0 248 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 KCNMB3Q9NPA1 279 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 GPCPD1Q9NPB8 672 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 TMOD4Q9NZQ9 345 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 DIS3Q9Y2L1 958 aaKnown RBP8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 USP27XA6NNY8 438 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 PDHXO00330 501 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 SLC26A4O43511 780 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 XRRA1Q6P2D8 792 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 CPLX2Q6PUV4 134 aaKnown RBP8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 FBXO11Q86XK2 927 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 PLA2G4DQ86XP0 818 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 BLIDQ8IZY5 108 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 SPICE1Q8N0Z3 855 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 CCDC12Q8WUD4 166 aaPredicted RBP8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 NUP133Q8WUM0 1156 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 CYP39A1Q9NYL5 469 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 RCOR1Q9UKL0 485 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 MCM3APO60318 1980 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 CTGFP29279 349 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 MARCKSP29966 332 aaPredicted RBP8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 PRPHP41219 470 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 USP11P51784 963 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 HUNKP57058 714 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 IRX5P78411 483 aaPredicted RBP8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 ZNF792Q3KQV3 632 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 PDILTQ8N807 584 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 TEX13BQ9BXU2 312 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 SPATC1LQ9H0A9 340 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 R3HDMLQ9H3Y0 253 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 ST7Q9NRC1 585 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 TMEM51Q9NW97 253 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 RNF216Q9NWF9 866 aaPredicted RBP8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 VPS54Q9P1Q0 977 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
GTF2H3-212ENST00000543341 PFASO15067 1338 aa8.27□□□□□ -1.09
GTF2H3-212ENST00000543341 CCP110O43303 1012 aa8.27□□□□□ -1.09
GTF2H3-212ENST00000543341 TLR2O60603 784 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms