RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 RGS20O76081 388 aa23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 PPP1R18Q6NYC8 613 aa23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 KCNV1Q6PIU1 500 aa23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 CXCL17Q6UXB2 119 aa23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 ANKRD33Q7Z3H0 272 aa23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 COPS5Q92905 334 aa23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 IL17RAQ96F46 866 aa23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 ZNF274Q96GC6 653 aaPredicted RBP23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 TOX2Q96NM4 488 aa23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 RBM27Q9P2N5 1060 aaKnown RBP23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 DDX41Q9UJV9 622 aaKnown RBP23.1■■□□□ 1.29
CACNA2D4-215ENST00000542340 A6NJR5 290 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 STAM2O75886 525 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 CDK7P50613 346 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 LY6KQ17RY6 165 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 XRRA1Q6P2D8 792 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 PRO3102Q9H379 93 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 POLR3EQ9NVU0 708 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 BARHL2Q9NY43 387 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 PRKAG2Q9UGJ0 569 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 MRVI1Q9Y6F6 885 aa23.09■■□□□ 1.29
CACNA2D4-215ENST00000542340 ARVCFO00192 962 aa23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 PRPF3O43395 683 aaKnown RBP23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 SEC24BO95487 1268 aa23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 GH1P01241 217 aa23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 TGFB3P10600 412 aa23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 NAPAP54920 295 aa23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 NTRK3Q16288 839 aa23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 PFKFB3Q16875 520 aaPredicted RBP23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 GDF15Q99988 308 aa23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 SEZ6LQ9BYH1 1024 aa23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 ALDH8A1Q9H2A2 487 aaPredicted RBP23.08■■□□□ 1.29
CACNA2D4-215ENST00000542340 MROH7Q68CQ1 1323 aa23.08■■□□□ 1.28
CACNA2D4-215ENST00000542340 STXBP3O00186 592 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 KPNA6O60684 536 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 PQBP1O60828 265 aaKnown RBP23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 SCG2P13521 617 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 IFNAR1P17181 557 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 MRPS9P82933 396 aaKnown RBP23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 ARHGAP1Q07960 439 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 PCNX4Q63HM2 1172 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 TYW1BQ6NUM6 668 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 SLC43A3Q8NBI5 491 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 GLT8D2Q9H1C3 349 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 RIC8AQ9NPQ8 531 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 PDLIM7Q9NR12 457 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 KIAA1217Q5T5P2 1943 aa23.07■■□□□ 1.28
CACNA2D4-215ENST00000542340 DCDC2CA8MYV0 355 aa23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 MAGEA10P43363 369 aaPredicted RBP23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 CCT2P78371 535 aaKnown RBP23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 PURAQ00577 322 aaKnown RBP23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 UBE2SQ16763 222 aa23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 GNPTABQ3T906 1256 aa23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 EMID1Q96A84 441 aaPredicted RBP23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 INPP4AQ96PE3 977 aaPredicted RBP23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 RNF26Q9BY78 433 aaPredicted RBP23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 NCOA5Q9HCD5 579 aaKnown RBP23.06■■□□□ 1.28
CACNA2D4-215ENST00000542340 SMCO2A6NFE2 343 aa23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 SPDYE3A6NKU9 549 aa23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 CLTBP09497 229 aa23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 BMP8BP34820 402 aa23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 ADCY7P51828 1080 aa23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 AKAP17AQ02040 695 aaKnown RBP23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 ITGA7Q13683 1181 aa23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 LAMC2Q13753 1193 aa23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 HABP4Q5JVS0 413 aaKnown RBP23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 ZFP91Q96JP5 570 aaPredicted RBP23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 LARP6Q9BRS8 491 aaKnown RBP23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 MTG1Q9BT17 334 aaPredicted RBP23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 PRDM5Q9NQX1 630 aaPredicted RBP23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 PCDHA6Q9UN73 950 aa23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 PCDHA8Q9Y5H6 950 aa23.05■■□□□ 1.28
CACNA2D4-215ENST00000542340 MYL3P08590 195 aa23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 ICAM3P32942 547 aa23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 FAAP100Q0VG06 881 aa23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 PKN1Q16512 942 aa23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 C8orf34Q49A92 452 aa23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 DHX37Q8IY37 1157 aaKnown RBP23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 AFG1LQ8WV93 481 aa23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 PHKBQ93100 1093 aa23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 LBHD1Q9BQE6 289 aaPredicted RBP23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 GRIN2DO15399 1336 aa23.04■■□□□ 1.28
CACNA2D4-215ENST00000542340 TRIM43BA6NCK2 446 aa23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 KIAA0355O15063 1070 aa23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 FOSP01100 380 aaPredicted RBP23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 MMP3P08254 477 aa23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 ANKRD1Q15327 319 aa23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 SH3RF1Q7Z6J0 888 aa23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 CCDC12Q8WUD4 166 aaPredicted RBP23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 TRIM43Q96BQ3 446 aaPredicted RBP23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 SLC26A6Q9BXS9 759 aa23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 EHMT1Q9H9B1 1298 aa23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 RTEL1Q9NZ71 1219 aa23.03■■□□□ 1.28
CACNA2D4-215ENST00000542340 A0A1W2PPC1 479 aa23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 ESYT2A0FGR8 921 aa23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 SPATA31C2B4DYI2 1134 aa23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 TLR3O15455 904 aaKnown RBP23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 FIBPO43427 364 aa23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 PSMC6P62333 389 aa23.02■■□□□ 1.28
CACNA2D4-215ENST00000542340 SP2Q02086 613 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms