RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 LIG3P49916 1009 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 ZNF132P52740 706 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 SIK1P57059 783 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 GNAI1P63096 354 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 TUBA1BP68363 451 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 CTBSQ01459 385 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 SNW1Q13573 536 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 BYSLQ13895 437 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 KCNB1Q14721 858 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 WHAMMP3Q1A5X7 153 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 SGSM1Q2NKQ1 1148 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 CCDC14Q49A88 953 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 BOLA3Q53S33 107 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 NAALADL2Q58DX5 795 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 LARP1BQ659C4 914 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 FAAH2Q6GMR7 532 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 CWC27Q6UX04 472 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 Q6ZNB5 142 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 TUBA1AQ71U36 451 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 RAB44Q7Z6P3 723 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 SKAP1Q86WV1 359 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 CCNJLQ8IV13 435 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 LRRC8AQ8IWT6 810 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 LMNTD2Q8IXW0 634 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 C17orf53Q8N3J3 647 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 ZBTB8BQ8NAP8 495 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 WHAMMQ8TF30 809 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 SREK1Q8WXA9 508 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 IRGQQ8WZA9 623 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 GOLGA1Q92805 767 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 SMARCC1Q92922 1105 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 GFM2Q969S9 779 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 ZNF653Q96CK0 615 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 MPP4Q96JB8 637 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 NSUN5Q96P11 429 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 TRAPPC9Q96Q05 1148 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 CGREF1Q99674 301 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 ZKSCAN3Q9BRR0 538 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 CCDC28BQ9BUN5 200 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 NOC4LQ9BVI4 516 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 USP26Q9BXU7 913 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 EIF2AQ9BY44 585 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 MRPL46Q9H2W6 279 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 VCPKMTQ9H867 229 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 EBF2Q9HAK2 575 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 VCX3AQ9NNX9 186 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 C6orf203Q9P0P8 240 aaPredicted RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 VPS18Q9P253 973 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 CTNNAL1Q9UBT7 734 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 PUF60Q9UHX1 559 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 RAB21Q9UL25 225 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 NSFL1CQ9UNZ2 370 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 ITM2BQ9Y287 266 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 EXOC6BQ9Y2D4 811 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 SLC30A1Q9Y6M5 507 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 SLC4A7Q9Y6M7 1214 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 CAPN7Q9Y6W3 813 aa4.83□□□□□ -1.64
SNHG1-219ENST00000542112 EIF2AK4Q9P2K8 1649 aaKnown RBP4.83□□□□□ -1.64
SNHG1-219ENST00000542112 RASSF10A6NK89 507 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 LRRIQ3A6PVS8 624 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 GPR25O00155 361 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 LSM1O15116 133 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 MGEA5O60502 916 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 BUB1BO60566 1050 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ZNF189O75820 626 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 BBOX1O75936 387 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 PARNO95453 639 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 GHRHP01286 108 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 PTGS1P23219 599 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ACADVLP49748 655 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ZNF75DP51815 510 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 CSE1LP55060 971 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 FCGRTP55899 365 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ETF1P62495 437 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 MRPS35P82673 323 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ACTN3Q08043 901 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 PPFIA1Q13136 1202 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 PWP1Q13610 501 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 GNL2Q13823 731 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 BLMHQ13867 455 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 SEPT6Q14141 434 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 EIF4A2Q14240 407 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 MYBPC3Q14896 1274 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 RCN1Q15293 331 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 LONRF2Q1L5Z9 754 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 COL13A1Q5TAT6 717 aaPredicted RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 MEI1Q5TIA1 1274 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 EMC10Q5UCC4 262 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 CREB3L3Q68CJ9 461 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 THOC7Q6I9Y2 204 aaKnown RBP4.82□□□□□ -1.64
SNHG1-219ENST00000542112 IQCEQ6IPM2 695 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 PACS1Q6VY07 963 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 DTHD1Q6ZMT9 781 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 SYT9Q86SS6 491 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 TMEM110Q86TL2 294 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ARHGEF25Q86VW2 580 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 NPAS3Q8IXF0 933 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 ZNF654Q8IZM8 581 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 MYO1HQ8N1T3 1032 aa4.82□□□□□ -1.64
SNHG1-219ENST00000542112 TTC39CQ8N584 583 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms