RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 FAM184BQ9ULE4 1060 aa16.99■□□□□ 0.31
CNOT9-208ENST00000542068 ZC3H4Q9UPT8 1303 aaKnown RBP16.99■□□□□ 0.31
CNOT9-208ENST00000542068 RHOBTB3O94955 611 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 AARSP49588 968 aaKnown RBP eCLIP16.98■□□□□ 0.31
CNOT9-208ENST00000542068 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 PPM1EQ8WY54 764 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 OSBPL9Q96SU4 736 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 SHANK3Q9BYB0 1731 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 RASA1P20936 1047 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 PAFAH1B1P43034 410 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 FBXW10Q5XX13 1052 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 IQCEQ6IPM2 695 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
CNOT9-208ENST00000542068 SEMA6BQ9H3T3 888 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 VIPAS39Q9H9C1 493 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 C6orf50Q9HD87 102 aa16.98■□□□□ 0.31
CNOT9-208ENST00000542068 RBM12Q9NTZ6 932 aaKnown RBP16.98■□□□□ 0.31
CNOT9-208ENST00000542068 NONOQ15233 471 aaKnown RBP eCLIP16.97■□□□□ 0.31
CNOT9-208ENST00000542068 UBE2SQ16763 222 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 MIIPQ5JXC2 388 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 C8orf74Q6P047 294 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 DGKHQ86XP1 1220 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 NFU1Q9UMS0 254 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 FAM169AQ9Y6X4 670 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 SF3A3Q12874 501 aaKnown RBP eCLIP16.97■□□□□ 0.31
CNOT9-208ENST00000542068 ZNF287Q9HBT7 754 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 KBTBD4Q9NVX7 518 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 MYH13Q9UKX3 1938 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 HSF2BPO75031 334 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 SERPINB2P05120 415 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 PCP11498 1178 aaKnown RBP16.97■□□□□ 0.31
CNOT9-208ENST00000542068 SLC1A4P43007 532 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
CNOT9-208ENST00000542068 GUCY2DQ02846 1103 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 TRADDQ15628 312 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 MEA1Q16626 185 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 TRIM58Q8NG06 486 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 NUP58Q9BVL2 599 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 TTYH3Q9C0H2 523 aa16.97■□□□□ 0.31
CNOT9-208ENST00000542068 SHTN1A0MZ66 631 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 BICDL2A1A5D9 508 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 POTEMA6NI47 508 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 OR52Z1P0C646 297 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 SLC10A5Q5PT55 438 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 KIAA0895Q8NCT3 520 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 DHTKD1Q96HY7 919 aaPredicted RBP16.96■□□□□ 0.31
CNOT9-208ENST00000542068 ALS2CR12Q96Q35 445 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 NDST4Q9H3R1 872 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 TM4SF1P30408 202 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 BARGINQ6ZT62 677 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 KCTD1Q719H9 257 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 KLHL7Q8IXQ5 586 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 CCDC170Q8IYT3 715 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 REXO1Q8N1G1 1221 aaKnown RBP16.96■□□□□ 0.31
CNOT9-208ENST00000542068 CCDC43Q96MW1 224 aaKnown RBP16.96■□□□□ 0.31
CNOT9-208ENST00000542068 GOLPH3Q9H4A6 298 aa16.96■□□□□ 0.31
CNOT9-208ENST00000542068 TARSL2A2RTX5 802 aaKnown RBP16.95■□□□□ 0.3
CNOT9-208ENST00000542068 NDUFAB1O14561 156 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 FAM153BP0C7A2 387 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 CARSP49589 748 aaKnown RBP16.95■□□□□ 0.3
CNOT9-208ENST00000542068 SNAP25P60880 206 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 FAM153CQ494X1 144 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 TADA2BQ86TJ2 420 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 NELFCDQ8IXH7 590 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 GPATCH11Q8N954 259 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 CALML4Q96GE6 196 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 EPB41L5Q9HCM4 733 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 FAM153AQ9UHL3 310 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 RPS6KA5O75582 802 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 ERLIN2O94905 339 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 KCNB1Q14721 858 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 ICE2Q659A1 982 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 FAM114A1Q8IWE2 563 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 MTMR8Q96EF0 704 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 SH2D4AQ9H788 454 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 HPDP32754 393 aaPredicted RBP16.95■□□□□ 0.3
CNOT9-208ENST00000542068 GRM4Q14833 912 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 AENQ8WTP8 325 aaKnown RBP16.95■□□□□ 0.3
CNOT9-208ENST00000542068 RPGRIP1Q96KN7 1286 aa16.95■□□□□ 0.3
CNOT9-208ENST00000542068 H0YHG0 523 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 TDP2O95551 362 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 VWA3BQ502W6 1294 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 TRMT1LQ7Z2T5 733 aaKnown RBP16.94■□□□□ 0.3
CNOT9-208ENST00000542068 BARHL2Q9NY43 387 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 STXBP3O00186 592 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 GNA11P29992 359 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 GUCY1A3Q02108 690 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 SBK1Q52WX2 424 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 TTMPQ5BVD1 217 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 NEK8Q86SG6 692 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 ZNF622Q969S3 477 aaKnown RBP eCLIP16.94■□□□□ 0.3
CNOT9-208ENST00000542068 KRT12Q99456 494 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 ZC3H12CQ9C0D7 883 aaKnown RBP16.94■□□□□ 0.3
CNOT9-208ENST00000542068 LEMD3Q9Y2U8 911 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 HYOU1Q9Y4L1 999 aa16.94■□□□□ 0.3
CNOT9-208ENST00000542068 UTRNP46939 3433 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms