RNA–Protein interactions for RNA: ENST00000542064.1

AP000439.2-201, humanhuman

TSL 2 BASIC

Gene AP000439.2, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.2-201ENST00000542064 MTA3Q9BTC8 594 aa14.78□□□□□ -0.04
AP000439.2-201ENST00000542064 UPF3BQ9BZI7 483 aaKnown RBP14.78□□□□□ -0.04
AP000439.2-201ENST00000542064 AP5M1Q9H0R1 490 aa14.78□□□□□ -0.04
AP000439.2-201ENST00000542064 NCOA5Q9HCD5 579 aaKnown RBP14.78□□□□□ -0.04
AP000439.2-201ENST00000542064 TRMT13Q9NUP7 481 aaKnown RBP14.78□□□□□ -0.04
AP000439.2-201ENST00000542064 CDH23Q9H251 3354 aa14.77□□□□□ -0.04
AP000439.2-201ENST00000542064 PTPRSQ13332 1948 aa14.77□□□□□ -0.04
AP000439.2-201ENST00000542064 A0A0U1RQG5 324 aaPredicted RBP14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 KIAA0355O15063 1070 aa14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 CD4P01730 458 aa14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 CASTP20810 708 aaKnown RBP14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 RPS6KB1P23443 525 aa14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 ITGA7Q13683 1181 aa14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 RTN1Q16799 776 aa14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 PCSK9Q8NBP7 692 aaKnown RBP14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 KAT2BQ92831 832 aa14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 RRP36Q96EU6 259 aaKnown RBP14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 GLT1D1Q96MS3 346 aa14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 CTAGE1Q96RT6 745 aa14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 RTEL1Q9NZ71 1219 aa14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 DDX41Q9UJV9 622 aaKnown RBP14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 NAP1L2Q9ULW6 460 aaPredicted RBP14.77□□□□□ -0.05
AP000439.2-201ENST00000542064 ELP1O95163 1332 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 GCOM1H8Y6P7 765 aaPredicted RBP14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 ZBTB43O43298 467 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 MMP3P08254 477 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 POLR2MP0CAP2 368 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 ZNF286BP0CG31 522 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 UBA1P22314 1058 aaKnown RBP14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 KIF5BP33176 963 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 CYP2C18P33260 490 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 FAM109BQ6ICB4 259 aaPredicted RBP14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 C16orf59Q7L2K0 433 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 HEATR3Q7Z4Q2 680 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 TDHQ8IZJ6 230 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 WNT8AQ9H1J5 351 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 TMEM39AQ9NV64 488 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 TMEM260Q9NX78 707 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 PNMA2Q9UL42 364 aa14.76□□□□□ -0.05
AP000439.2-201ENST00000542064 TET1Q8NFU7 2136 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 LOC102724159A0A0B4J2E5 919 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 A6NJR5 290 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 STXBP3O00186 592 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 ACRP10323 421 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 CYP2C9P11712 490 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 CHMP4BP1P59074 171 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 PWP2Q15269 919 aaKnown RBP14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 STXBP2Q15833 593 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 NBPF20Q3BBV1 942 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 VSIG10LQ86VR7 867 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 PHKBQ93100 1093 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 SPC25Q9HBM1 224 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 Q9Y3F1 56 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 EYSQ5T1H1 3165 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 COL6A3P12111 3177 aa14.75□□□□□ -0.05
AP000439.2-201ENST00000542064 NID2Q14112 1375 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 TTLL4Q14679 1199 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 PKN1Q16512 942 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 HSDL1Q3SXM5 330 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 BLOC1S2Q6QNY1 142 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 WNT8BQ93098 351 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 SCLYQ96I15 445 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 UIMC1Q96RL1 719 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 IWS1Q96ST2 819 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 AGXT2Q9BYV1 514 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 ALDH8A1Q9H2A2 487 aaPredicted RBP14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 MRVI1Q9Y6F6 885 aa14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 V9GY48 417 aaPredicted RBP14.74□□□□□ -0.05
AP000439.2-201ENST00000542064 SIP14410 1827 aa14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 GH1P01241 217 aa14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 CSF2RAP15509 400 aa14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 CCL23P55773 120 aa14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 CCT2P78371 535 aaKnown RBP14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 ZNF200P98182 395 aaPredicted RBP14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 KRT32Q14532 448 aa14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 NTRK3Q16288 839 aa14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 TMTC2Q8N394 836 aa14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 TOX2Q96NM4 488 aa14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 LBHD1Q9BQE6 289 aaPredicted RBP14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 NOC4LQ9BVI4 516 aaKnown RBP14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 PKD2L1Q9P0L9 805 aa14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 SEC63Q9UGP8 760 aaKnown RBP14.73□□□□□ -0.05
AP000439.2-201ENST00000542064 DCDC2CA8MYV0 355 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 ATP9AO75110 1047 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 EIF3JO75822 258 aaKnown RBP14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 REC8O95072 547 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 LARGE1O95461 756 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 GGPS1O95749 300 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 TIMP1P01033 207 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 CALM1P0DP23 149 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 CALM2P0DP24 149 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 CALM3P0DP25 149 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 RAG1P15918 1043 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 SMARCA1P28370 1054 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 CCND2P30279 289 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 GNAQP50148 359 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 METAP2P50579 478 aaKnown RBP eCLIP14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 TCTN1Q2MV58 587 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 FAM47CQ5HY64 1035 aa14.72□□□□□ -0.05
AP000439.2-201ENST00000542064 MYSM1Q5VVJ2 828 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms