RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 GJB5O95377 273 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 CXCL10P02778 98 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 CKBP12277 381 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 HAND2P61296 217 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 ARHGAP1Q07960 439 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 PTK7Q13308 1070 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 LAMC2Q13753 1193 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 CDC37Q16543 378 aaPredicted RBP14.33□□□□□ -0.12
SNHG1-216ENST00000541416 LY6KQ17RY6 165 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 ARHGEF16Q5VV41 709 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 EPHX3Q9H6B9 360 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 KAT14Q9H8E8 782 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 CTNNA3Q9UI47 895 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 EMSYQ7Z589 1322 aa14.33□□□□□ -0.12
SNHG1-216ENST00000541416 TET1Q8NFU7 2136 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 ZNF213O14771 459 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 DHX16O60231 1041 aaKnown RBP14.32□□□□□ -0.12
SNHG1-216ENST00000541416 LPXNO60711 386 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 GPR37L1O60883 481 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 ARHGEF15O94989 841 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 GOLGA8HP0CJ92 632 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
SNHG1-216ENST00000541416 ERVK-21P61565 698 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 ASPRV1Q53RT3 343 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 KCNV1Q6PIU1 500 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 DHX37Q8IY37 1157 aaKnown RBP14.32□□□□□ -0.12
SNHG1-216ENST00000541416 PNMA1Q8ND90 353 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 GDPD5Q8WTR4 605 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
SNHG1-216ENST00000541416 FAM227BQ96M60 508 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 INSL6Q9Y581 213 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 PCDHB15Q9Y5E8 787 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 MRVI1Q9Y6F6 885 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 CCDC171Q6TFL3 1326 aa14.32□□□□□ -0.12
SNHG1-216ENST00000541416 COL4A4P53420 1690 aaPredicted RBP14.32□□□□□ -0.12
SNHG1-216ENST00000541416 A0A0D9SFI3 127 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 LCHNA4D1U4 455 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 TRIM6-TRIM34B2RNG4 842 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 AMHP03971 560 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 PSEN2P49810 448 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 PDE1AP54750 535 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 DEFB103AP81534 67 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 MFSD10Q14728 455 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 PUS10Q3MIT2 529 aaKnown RBP14.31□□□□□ -0.12
SNHG1-216ENST00000541416 PPTC7Q8NI37 304 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 SYTL5Q8TDW5 730 aaPredicted RBP14.31□□□□□ -0.12
SNHG1-216ENST00000541416 KAT2BQ92831 832 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 TAAR1Q96RJ0 339 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 UBA5Q9GZZ9 404 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 UBE2ZQ9H832 354 aaPredicted RBP14.31□□□□□ -0.12
SNHG1-216ENST00000541416 SUGCTQ9HAC7 445 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 HDAC6Q9UBN7 1215 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 MTUS1Q9ULD2 1270 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 SALL3Q9BXA9 1300 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 KIAA1217Q5T5P2 1943 aa14.31□□□□□ -0.12
SNHG1-216ENST00000541416 LINC01553A4QN01 128 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 NBNO60934 754 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 F2P00734 622 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 PTPROQ16827 1216 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 KIAA0753Q2KHM9 967 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 FBXO11Q86XK2 927 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 ADGRF4Q8IZF3 695 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 DHX38Q92620 1227 aaKnown RBP14.3□□□□□ -0.12
SNHG1-216ENST00000541416 SAMD11Q96NU1 681 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 ALG1Q9BT22 464 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 MAP3K20Q9NYL2 800 aaKnown RBP14.3□□□□□ -0.12
SNHG1-216ENST00000541416 DDX41Q9UJV9 622 aaKnown RBP14.3□□□□□ -0.12
SNHG1-216ENST00000541416 FAM50BQ9Y247 325 aa14.3□□□□□ -0.12
SNHG1-216ENST00000541416 PI4K2BG5E9Z4 385 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 PPFIA4O75335 1185 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 LGR5O75473 907 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 NR3C2P08235 984 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 PARP1P09874 1014 aaKnown RBP14.29□□□□□ -0.12
SNHG1-216ENST00000541416 ALADP13716 330 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 EIF2AK2P19525 551 aaKnown RBP14.29□□□□□ -0.12
SNHG1-216ENST00000541416 TRAF1Q13077 416 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 NMIQ13287 307 aaPredicted RBP14.29□□□□□ -0.12
SNHG1-216ENST00000541416 GPNMBQ14956 572 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 LEXMQ3ZCV2 418 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 FBXO22Q8NEZ5 403 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 CTAGE1Q96RT6 745 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 ZKSCAN3Q9BRR0 538 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 PXMP2Q9NR77 195 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 SIP14410 1827 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 MYH6P13533 1939 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
SNHG1-216ENST00000541416 CFBP00751 764 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 KCNA5P22460 613 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 SSTR3P32745 418 aaPredicted RBP14.28□□□□□ -0.12
SNHG1-216ENST00000541416 QRICH1Q2TAL8 776 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 ZNF618Q5T7W0 954 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 FAM117BQ6P1L5 589 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 TMCO2Q7Z6W1 182 aaPredicted RBP14.28□□□□□ -0.12
SNHG1-216ENST00000541416 ZNF589Q86UQ0 364 aaPredicted RBP14.28□□□□□ -0.12
SNHG1-216ENST00000541416 TBC1D10CQ8IV04 446 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 GJD3Q8N144 294 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 SAMD3Q8N6K7 520 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 TBC1D5Q92609 795 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 RILPL2Q969X0 211 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms