RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 H2AFZP0C0S5 128 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 DDIT3P35638 169 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 TFDP1Q14186 410 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 H2AFVQ71UI9 128 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 OTUB1Q96FW1 271 aaPredicted RBP16.6■□□□□ 0.25
HMGA2-210ENST00000541363 ATP8A2Q9NTI2 1148 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 ZNF229Q9UJW7 825 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 ATP11BQ9Y2G3 1177 aa16.6■□□□□ 0.25
HMGA2-210ENST00000541363 ZBTB12Q9Y330 459 aaPredicted RBP16.59■□□□□ 0.25
HMGA2-210ENST00000541363 FSCBQ5H9T9 825 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 SUPT20HQ8NEM7 779 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 PCDHA12Q9UN75 941 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 DMRT2Q9Y5R5 561 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 EPHB4P54760 987 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 CHRNA2Q15822 529 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 PPHLN1Q8NEY8 458 aaKnown RBP16.59■□□□□ 0.25
HMGA2-210ENST00000541363 HAUS4Q9H6D7 363 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 NCOA5Q9HCD5 579 aaKnown RBP16.59■□□□□ 0.25
HMGA2-210ENST00000541363 PDE6BP35913 854 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 KRT26Q7Z3Y9 468 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 APPBP2Q92624 585 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 CSADQ9Y600 493 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 ZSCAN9O15535 394 aaPredicted RBP16.59■□□□□ 0.25
HMGA2-210ENST00000541363 CTNND1O60716 968 aaKnown RBP16.59■□□□□ 0.25
HMGA2-210ENST00000541363 DAB1O75553 588 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 AARSP49588 968 aaKnown RBP eCLIP16.59■□□□□ 0.25
HMGA2-210ENST00000541363 DYDC2Q96IM9 177 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 PHACTR3Q96KR7 559 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 SNX2O60749 519 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 HSPA1AP0DMV8 641 aaKnown RBP16.59■□□□□ 0.25
HMGA2-210ENST00000541363 HSPA1BP0DMV9 641 aaKnown RBP16.59■□□□□ 0.25
HMGA2-210ENST00000541363 TECP42680 631 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 TRPC1P48995 793 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 TEKT3Q9BXF9 490 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 LRRIQ4A6NIV6 560 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 GPAA1O43292 621 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 PSMC1P62191 440 aaKnown RBP16.59■□□□□ 0.25
HMGA2-210ENST00000541363 CEP85Q6P2H3 762 aa16.59■□□□□ 0.25
HMGA2-210ENST00000541363 ECEL1O95672 775 aa16.58■□□□□ 0.25
HMGA2-210ENST00000541363 SLFN14P0C7P3 912 aa16.58■□□□□ 0.25
HMGA2-210ENST00000541363 DESI2Q9BSY9 194 aa16.58■□□□□ 0.25
HMGA2-210ENST00000541363 DDX25Q9UHL0 483 aaKnown RBP16.58■□□□□ 0.25
HMGA2-210ENST00000541363 MSH6P52701 1360 aa16.58■□□□□ 0.25
HMGA2-210ENST00000541363 SLC9A1P19634 815 aa16.58■□□□□ 0.25
HMGA2-210ENST00000541363 EHHADHQ08426 723 aa16.58■□□□□ 0.25
HMGA2-210ENST00000541363 EXOC3L4Q17RC7 722 aa16.58■□□□□ 0.25
HMGA2-210ENST00000541363 NEK8Q86SG6 692 aa16.58■□□□□ 0.25
HMGA2-210ENST00000541363 STMN3Q9NZ72 180 aa16.58■□□□□ 0.25
HMGA2-210ENST00000541363 FNDC3AQ9Y2H6 1198 aaKnown RBP16.58■□□□□ 0.25
HMGA2-210ENST00000541363 RASSF7Q02833 373 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 TAF1BQ53T94 588 aaPredicted RBP16.58■□□□□ 0.24
HMGA2-210ENST00000541363 LRRC8BQ6P9F7 803 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 ATP8A1Q9Y2Q0 1164 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 SYNDIG1LA6NDD5 238 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 BASP1P80723 227 aaKnown RBP16.58■□□□□ 0.24
HMGA2-210ENST00000541363 CYP4F22Q6NT55 531 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 C1orf228Q6PIY5 440 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 CACTINQ8WUQ7 758 aaKnown RBP16.58■□□□□ 0.24
HMGA2-210ENST00000541363 COL4A3BPQ9Y5P4 624 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 TCP10Q12799 353 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 STK17AQ9UEE5 414 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 TBK1Q9UHD2 729 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 FBXO2Q9UK22 296 aaPredicted RBP16.58■□□□□ 0.24
HMGA2-210ENST00000541363 LRFN2Q9ULH4 789 aa16.58■□□□□ 0.24
HMGA2-210ENST00000541363 ATG3Q9NT62 314 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 CTDSPL2Q05D32 466 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 ACAD11Q709F0 780 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 SERTAD1Q9UHV2 236 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 G3BP2Q9UN86 482 aaKnown RBP16.57■□□□□ 0.24
HMGA2-210ENST00000541363 KIF14Q15058 1648 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 ARHGEF37A1IGU5 675 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 WDR91A4D1P6 747 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 HSPA4LO95757 839 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 TCF3P15923 654 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 MDM2Q00987 491 aaPredicted RBP16.57■□□□□ 0.24
HMGA2-210ENST00000541363 ALS2CLQ60I27 953 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 SLC26A7Q8TE54 656 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 EXOC1LA0A1B0GW35 172 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 MRPL11Q9Y3B7 192 aaKnown RBP16.57■□□□□ 0.24
HMGA2-210ENST00000541363 ADCY1Q08828 1119 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 ELMSAN1Q6PJG2 1045 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 MTRQ99707 1265 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 VPS54Q9P1Q0 977 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 STAMQ92783 540 aa16.57■□□□□ 0.24
HMGA2-210ENST00000541363 IPO5O00410 1097 aaKnown RBP16.56■□□□□ 0.24
HMGA2-210ENST00000541363 ANXA13P27216 316 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 SUGCTQ9HAC7 445 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 NRBP2Q9NSY0 501 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 PRG4Q92954 1404 aaPredicted RBP16.56■□□□□ 0.24
HMGA2-210ENST00000541363 KRT1P04264 644 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 POLR2MP0CAP2 368 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 NSUN2Q08J23 767 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGA2-210ENST00000541363 BTN2A2Q8WVV5 523 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 EXT2Q93063 718 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 ZNF445P59923 1031 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
HMGA2-210ENST00000541363 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.56■□□□□ 0.243e-6■■□□□ 12.2
HMGA2-210ENST00000541363 KCNJ14Q9UNX9 436 aa16.56■□□□□ 0.24
HMGA2-210ENST00000541363 ADAM9Q13443 819 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms