RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 SLC30A10Q6XR72 485 aa20.03■□□□□ 0.8
CLIP1-215ENST00000541108 ETNPPLQ8TBG4 499 aa20.03■□□□□ 0.8
CLIP1-215ENST00000541108 TAAR1Q96RJ0 339 aa20.03■□□□□ 0.8
CLIP1-215ENST00000541108 RMDN3Q96TC7 470 aa20.03■□□□□ 0.8
CLIP1-215ENST00000541108 HOOK1Q9UJC3 728 aaKnown RBP20.03■□□□□ 0.8
CLIP1-215ENST00000541108 PFASO15067 1338 aa20.03■□□□□ 0.8
CLIP1-215ENST00000541108 MEIS1O00470 390 aa20.02■□□□□ 0.8
CLIP1-215ENST00000541108 TOMM70O94826 608 aa20.02■□□□□ 0.8
CLIP1-215ENST00000541108 SETQ01105 290 aaPredicted RBP20.02■□□□□ 0.8
CLIP1-215ENST00000541108 MKRN3Q13064 507 aaKnown RBP20.02■□□□□ 0.8
CLIP1-215ENST00000541108 NIPA1Q7RTP0 329 aa20.02■□□□□ 0.8
CLIP1-215ENST00000541108 IQUBQ8NA54 791 aa20.02■□□□□ 0.8
CLIP1-215ENST00000541108 CNNM3Q8NE01 707 aa20.02■□□□□ 0.8
CLIP1-215ENST00000541108 PAGR1Q9BTK6 254 aa20.02■□□□□ 0.8
CLIP1-215ENST00000541108 MOV10L1Q9BXT6 1211 aaKnown RBP20.02■□□□□ 0.8
CLIP1-215ENST00000541108 PXMP2Q9NR77 195 aa20.02■□□□□ 0.8
CLIP1-215ENST00000541108 TLL2Q9Y6L7 1015 aa20.02■□□□□ 0.8
CLIP1-215ENST00000541108 BCRP11274 1271 aa20.01■□□□□ 0.79
CLIP1-215ENST00000541108 GCLCP48506 637 aaPredicted RBP20.01■□□□□ 0.79
CLIP1-215ENST00000541108 PGM5Q15124 567 aa20.01■□□□□ 0.79
CLIP1-215ENST00000541108 RASAL3Q86YV0 1011 aa20.01■□□□□ 0.79
CLIP1-215ENST00000541108 NSUN6Q8TEA1 469 aaKnown RBP20.01■□□□□ 0.79
CLIP1-215ENST00000541108 SMCR8Q8TEV9 937 aaPredicted RBP20.01■□□□□ 0.79
CLIP1-215ENST00000541108 MXRA8Q9BRK3 442 aa20.01■□□□□ 0.79
CLIP1-215ENST00000541108 TXNRD2Q9NNW7 524 aa20.01■□□□□ 0.79
CLIP1-215ENST00000541108 ZCCHC17Q9NP64 241 aaKnown RBP20.01■□□□□ 0.79
CLIP1-215ENST00000541108 LRWD1Q9UFC0 647 aa20.01■□□□□ 0.79
CLIP1-215ENST00000541108 CCDC39Q9UFE4 941 aa20.01■□□□□ 0.79
CLIP1-215ENST00000541108 MANSC4A6NHS7 340 aaPredicted RBP20■□□□□ 0.79
CLIP1-215ENST00000541108 SLFN14P0C7P3 912 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 INHBEP58166 350 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 ARHGEF16Q5VV41 709 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 PDILTQ8N807 584 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 SHCBP1Q8NEM2 672 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 DNERQ8NFT8 737 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 CYP2W1Q8TAV3 490 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 HHIPL1Q96JK4 782 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 PDCD2LQ9BRP1 358 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 MROH8Q9H579 483 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 A0A087X0B3 334 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 MSH4O15457 936 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 CYP2C8P10632 490 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 UBXN2AP68543 259 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 Q3C1V9 767 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 NCAPG2Q86XI2 1143 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 PLA2G4DQ86XP0 818 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 CKAP2LQ8IYA6 745 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 ANKRD35Q8N283 1001 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 CCDC102AQ96A19 550 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 FUCA2Q9BTY2 467 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 PANK2Q9BZ23 570 aa20■□□□□ 0.79
CLIP1-215ENST00000541108 SLC26A4O43511 780 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 ACTN4O43707 911 aaKnown RBP19.99■□□□□ 0.79
CLIP1-215ENST00000541108 CCDC192P0DO97 292 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 ERCC3P19447 782 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 CDC25AP30304 524 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 ERVK-9P63128 1117 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 ERVK-24P63145 666 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 E2F4Q16254 413 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 CABP7Q86V35 215 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 FAM43AQ8N2R8 423 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 PARK7Q99497 189 aaKnown RBP19.99■□□□□ 0.79
CLIP1-215ENST00000541108 PTPN18Q99952 460 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 DISC1Q9NRI5 854 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 KIAA1468Q9P260 1216 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 SERTAD1Q9UHV2 236 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 UBIAD1Q9Y5Z9 338 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 STK24Q9Y6E0 443 aa19.99■□□□□ 0.79
CLIP1-215ENST00000541108 CCNA1P78396 465 aa19.98■□□□□ 0.79
CLIP1-215ENST00000541108 MRPS9P82933 396 aaKnown RBP19.98■□□□□ 0.79
CLIP1-215ENST00000541108 MDM2Q00987 491 aaPredicted RBP19.98■□□□□ 0.79
CLIP1-215ENST00000541108 VSIG10LQ86VR7 867 aa19.98■□□□□ 0.79
CLIP1-215ENST00000541108 GAS2L3Q86XJ1 694 aa19.98■□□□□ 0.79
CLIP1-215ENST00000541108 CEP57L1Q8IYX8 460 aa19.98■□□□□ 0.79
CLIP1-215ENST00000541108 GPRC5AQ8NFJ5 357 aa19.98■□□□□ 0.79
CLIP1-215ENST00000541108 DHX58Q96C10 678 aa19.98■□□□□ 0.79
CLIP1-215ENST00000541108 IWS1Q96ST2 819 aa19.98■□□□□ 0.79
CLIP1-215ENST00000541108 CUEDC2Q9H467 287 aa19.98■□□□□ 0.79
CLIP1-215ENST00000541108 FSD2A1L4K1 749 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 TMEM88BA6NKF7 163 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 PP2D1A8MPX8 630 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 MAFGO15525 162 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 PEX10O60683 326 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 STAM2O75886 525 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 NR3C2P08235 984 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 SLC10A3P09131 477 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 ITGB5P18084 799 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 EIF2AK2P19525 551 aaKnown RBP19.97■□□□□ 0.79
CLIP1-215ENST00000541108 KRT79Q5XKE5 535 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 SASS6Q6UVJ0 657 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 SLC5A5Q92911 643 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 CALML4Q96GE6 196 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 TSPY26PQ9H489 355 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 JADE2Q9NQC1 790 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 MORF4L1Q9UBU8 362 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 GOLGA6L3A6NEY3 463 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 POTEMA6NI47 508 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 CCND2P30279 289 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 SPIRE1Q08AE8 756 aa19.97■□□□□ 0.79
CLIP1-215ENST00000541108 FSTL1Q12841 308 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms