RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 RANBP2P49792 3224 aaKnown RBP16.43■□□□□ 0.22
LTBR-209ENST00000541102 MROH7Q68CQ1 1323 aa16.43■□□□□ 0.22
LTBR-209ENST00000541102 NKRFO15226 690 aaKnown RBP eCLIP16.42■□□□□ 0.22
LTBR-209ENST00000541102 ARIH2O95376 493 aa16.42■□□□□ 0.22
LTBR-209ENST00000541102 CPT1AP50416 773 aa16.42■□□□□ 0.22
LTBR-209ENST00000541102 NEK4P51957 841 aa16.42■□□□□ 0.22
LTBR-209ENST00000541102 AK2P54819 239 aa16.42■□□□□ 0.22
LTBR-209ENST00000541102 FGD1P98174 961 aa16.42■□□□□ 0.22
LTBR-209ENST00000541102 BRDTQ58F21 947 aaPredicted RBP16.42■□□□□ 0.22
LTBR-209ENST00000541102 ZFP91Q96JP5 570 aaPredicted RBP16.42■□□□□ 0.22
LTBR-209ENST00000541102 POLR3EQ9NVU0 708 aa16.42■□□□□ 0.22
LTBR-209ENST00000541102 MAP3K20Q9NYL2 800 aaKnown RBP16.42■□□□□ 0.22
LTBR-209ENST00000541102 SEC63Q9UGP8 760 aaKnown RBP16.42■□□□□ 0.22
LTBR-209ENST00000541102 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
LTBR-209ENST00000541102 hCG_1642624A0A1W2PR95 340 aa16.41■□□□□ 0.22
LTBR-209ENST00000541102 TLR3O15455 904 aaKnown RBP16.41■□□□□ 0.22
LTBR-209ENST00000541102 DTNBO60941 627 aa16.41■□□□□ 0.22
LTBR-209ENST00000541102 EIF3JO75822 258 aaKnown RBP16.41■□□□□ 0.22
LTBR-209ENST00000541102 SMARCA1P28370 1054 aa16.41■□□□□ 0.22
LTBR-209ENST00000541102 CDC27P30260 824 aa16.41■□□□□ 0.22
LTBR-209ENST00000541102 GHRHRQ02643 423 aa16.41■□□□□ 0.22
LTBR-209ENST00000541102 LY6KQ17RY6 165 aa16.41■□□□□ 0.22
LTBR-209ENST00000541102 CCDC62Q6P9F0 684 aa16.41■□□□□ 0.22
LTBR-209ENST00000541102 FANCBQ8NB91 859 aa16.41■□□□□ 0.22
LTBR-209ENST00000541102 NAP1L2Q9ULW6 460 aaPredicted RBP16.41■□□□□ 0.22
LTBR-209ENST00000541102 GRIN2DO15399 1336 aa16.41■□□□□ 0.22
LTBR-209ENST00000541102 GOLGA8BA8MQT2 603 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 PDIA3P30101 505 aaKnown RBP16.4■□□□□ 0.22
LTBR-209ENST00000541102 EVCP57679 992 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 SHHQ15465 462 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 LRIT3Q3SXY7 679 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 C9orf50Q5SZB4 431 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 FAM126BQ8IXS8 530 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 SAMD3Q8N6K7 520 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 SLC43A3Q8NBI5 491 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 PDCD2LQ9BRP1 358 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 MTG1Q9BT17 334 aaPredicted RBP16.4■□□□□ 0.22
LTBR-209ENST00000541102 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 TBX21Q9UL17 535 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 TPCN1Q9ULQ1 816 aa16.4■□□□□ 0.22
LTBR-209ENST00000541102 A6NJR5 290 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 ZBTB43O43298 467 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 LARGE1O95461 756 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 TIMP1P01033 207 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 GH1P01241 217 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 PURAQ00577 322 aaKnown RBP16.39■□□□□ 0.21
LTBR-209ENST00000541102 FPGSQ05932 587 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 PGM5Q15124 567 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 VSIG10LQ86VR7 867 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 IL31RAQ8NI17 732 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 PPP1R13LQ8WUF5 828 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 AFG1LQ8WV93 481 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 TRPV6Q9H1D0 765 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 ALDH8A1Q9H2A2 487 aaPredicted RBP16.39■□□□□ 0.21
LTBR-209ENST00000541102 UPF2Q9HAU5 1272 aaKnown RBP16.39■□□□□ 0.21
LTBR-209ENST00000541102 NCOA5Q9HCD5 579 aaKnown RBP16.39■□□□□ 0.21
LTBR-209ENST00000541102 DDX41Q9UJV9 622 aaKnown RBP16.39■□□□□ 0.21
LTBR-209ENST00000541102 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
LTBR-209ENST00000541102 GOLGA8AA7E2F4 631 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 SORBS3O60504 671 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 KPNA6O60684 536 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 PPFIA3O75145 1194 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 CD2BP2O95400 341 aaKnown RBP16.38■□□□□ 0.21
LTBR-209ENST00000541102 CCND2P30279 289 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
LTBR-209ENST00000541102 EPHB4P54760 987 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 CCT2P78371 535 aaKnown RBP16.38■□□□□ 0.21
LTBR-209ENST00000541102 ARHGAP1Q07960 439 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 FUT2Q10981 343 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 FAM47CQ5HY64 1035 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 USP17L6PQ6QN14 398 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 TMTC3Q6ZXV5 915 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 SMARCC2Q8TAQ2 1214 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 CUL5Q93034 780 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 LTBP2Q14767 1821 aa16.38■□□□□ 0.21
LTBR-209ENST00000541102 CD4P01730 458 aa16.37■□□□□ 0.21
LTBR-209ENST00000541102 CYP2C18P33260 490 aa16.37■□□□□ 0.21
LTBR-209ENST00000541102 STK3Q13188 491 aa16.37■□□□□ 0.21
LTBR-209ENST00000541102 RTN1Q16799 776 aa16.37■□□□□ 0.21
LTBR-209ENST00000541102 NBPF20Q3BBV1 942 aa16.37■□□□□ 0.21
LTBR-209ENST00000541102 MFSD5Q6N075 450 aa16.37■□□□□ 0.21
LTBR-209ENST00000541102 SEZ6LQ9BYH1 1024 aa16.37■□□□□ 0.21
LTBR-209ENST00000541102 NID2Q14112 1375 aa16.37■□□□□ 0.21
LTBR-209ENST00000541102 B4GALT4O60513 344 aa16.36■□□□□ 0.21
LTBR-209ENST00000541102 RGS20O76081 388 aa16.36■□□□□ 0.21
LTBR-209ENST00000541102 METAP2P50579 478 aaKnown RBP eCLIP16.36■□□□□ 0.21
LTBR-209ENST00000541102 HEATR3Q7Z4Q2 680 aa16.36■□□□□ 0.21
LTBR-209ENST00000541102 DHX37Q8IY37 1157 aaKnown RBP16.36■□□□□ 0.21
LTBR-209ENST00000541102 PSTPIP2Q9H939 334 aa16.36■□□□□ 0.21
LTBR-209ENST00000541102 TRMT13Q9NUP7 481 aaKnown RBP16.36■□□□□ 0.21
LTBR-209ENST00000541102 RBM28Q9NW13 759 aaKnown RBP16.36■□□□□ 0.21
LTBR-209ENST00000541102 MMP3P08254 477 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 ST3GAL1Q11201 340 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 LAMC2Q13753 1193 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 ME3Q16798 604 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 KCNV1Q6PIU1 500 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 TMEM199Q8N511 208 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 NECAB1Q8N987 351 aa16.35■□□□□ 0.21
LTBR-209ENST00000541102 GPKOWQ92917 476 aaPredicted RBP eCLIP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms