RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 INO80BQ9C086 356 aaPredicted RBP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 RNF146Q9NTX7 359 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 MYO6Q9UM54 1294 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 ARHGAP6O43182 974 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 PRCPP42785 496 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 SF3A3Q12874 501 aaKnown RBP eCLIP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 SHROOM1Q2M3G4 852 aaPredicted RBP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 CCDC144BQ3MJ40 725 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 CYP26C1Q6V0L0 522 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 CCDC25Q86WR0 208 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 LDHDQ86WU2 507 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 OR8K1Q8NGG5 319 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 RTFDC1Q9BY42 306 aaPredicted RBP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 RPAP3Q9H6T3 665 aaPredicted RBP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 SHPRHQ149N8 1683 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 SOWAHDA6NJG2 315 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 TEX33O43247 280 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 INPP5BP32019 993 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 CETN2P41208 172 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 TRPC3Q13507 836 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 ASIC2Q16515 512 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 KIAA0753Q2KHM9 967 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 EARS2Q5JPH6 523 aaKnown RBP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 POTEAQ6S8J7 498 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 METTL16Q86W50 562 aaKnown RBP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 ACRBPQ8NEB7 543 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 U2AF1L4Q8WU68 220 aaKnown RBP10.54□□□□□ -0.72
TTC39C-203ENST00000540918 PRIMPOLQ96LW4 560 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 TSPYL1Q9H0U9 437 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 ST7Q9NRC1 585 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 COL4A3BPQ9Y5P4 624 aa10.54□□□□□ -0.72
TTC39C-203ENST00000540918 LIG4P49917 911 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 SLC9C1Q4G0N8 1177 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 HS1BP3Q53T59 392 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 WDR44Q5JSH3 913 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 DPF2Q92785 391 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 MYOZ2Q9NPC6 264 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 SPTLC3Q9NUV7 552 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 KDM3AQ9Y4C1 1321 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 EIF3JO75822 258 aaKnown RBP10.53□□□□□ -0.72
TTC39C-203ENST00000540918 PEX3P56589 373 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 NCBP1Q09161 790 aaKnown RBP10.53□□□□□ -0.72
TTC39C-203ENST00000540918 SMC1AQ14683 1233 aaKnown RBP10.53□□□□□ -0.72
TTC39C-203ENST00000540918 C16orf86Q6ZW13 317 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 ZBTB33Q86T24 672 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 KLHL7Q8IXQ5 586 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 P2RX5Q93086 422 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 IFIH1Q9BYX4 1025 aaKnown RBP10.53□□□□□ -0.72
TTC39C-203ENST00000540918 DDNO94850 711 aaPredicted RBP10.53□□□□□ -0.72
TTC39C-203ENST00000540918 PDXDC2PQ6P474 469 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 MRRFQ96E11 262 aaKnown RBP10.53□□□□□ -0.72
TTC39C-203ENST00000540918 DYDC2Q96IM9 177 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 RABEP2Q9H5N1 569 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 JMJD4Q9H9V9 463 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 CTTNBP2NLQ9P2B4 639 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 PRR12Q9ULL5 1215 aa10.53□□□□□ -0.72
TTC39C-203ENST00000540918 TLDC2A0PJX2 215 aa10.52□□□□□ -0.72
TTC39C-203ENST00000540918 SPOPO43791 374 aa10.52□□□□□ -0.72
TTC39C-203ENST00000540918 NAA35Q5VZE5 725 aa10.52□□□□□ -0.72
TTC39C-203ENST00000540918 CYFIP1Q7L576 1253 aa10.52□□□□□ -0.72
TTC39C-203ENST00000540918 TAB3Q8N5C8 712 aaPredicted RBP10.52□□□□□ -0.72
TTC39C-203ENST00000540918 TMEM87AQ8NBN3 555 aa10.52□□□□□ -0.72
TTC39C-203ENST00000540918 MAP7D2Q96T17 732 aa10.52□□□□□ -0.72
TTC39C-203ENST00000540918 IL17RBQ9NRM6 502 aa10.52□□□□□ -0.72
TTC39C-203ENST00000540918 FBXO2Q9UK22 296 aaPredicted RBP10.52□□□□□ -0.72
TTC39C-203ENST00000540918 CCDC172P0C7W6 258 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 MTMR1Q13613 665 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 ERCC6LQ2NKX8 1250 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 SFMBT2Q5VUG0 894 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 OTUD6AQ7L8S5 288 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 PROCA1Q8NCQ7 364 aaPredicted RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 NLRP4Q96MN2 994 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 FAM49AQ9H0Q0 323 aaPredicted RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 HACL1Q9UJ83 578 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 RFX7Q2KHR2 1363 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 KIF13AQ9H1H9 1805 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 CXCR5P32302 372 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 RDXP35241 583 aaKnown RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 SEPT7Q16181 437 aaKnown RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 SBK1Q52WX2 424 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 NBPF12Q5TAG4 269 aaPredicted RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 KSR1Q8IVT5 923 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 CERS5Q8N5B7 392 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 PHF20Q9BVI0 1012 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 ZNF215Q9UL58 517 aaPredicted RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 DISP2A7MBM2 1401 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 IREB2P48200 963 aaKnown RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 PPP2R3AQ06190 1150 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 ZNF658Q5TYW1 1059 aaPredicted RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 MTERF4Q7Z6M4 381 aaKnown RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 SFR1Q86XK3 245 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 ZNF354CQ86Y25 554 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 PRPF38AQ8NAV1 312 aaKnown RBP10.52□□□□□ -0.73
TTC39C-203ENST00000540918 MRFAP1L1Q96HT8 127 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 PPP2R2CQ9Y2T4 447 aa10.52□□□□□ -0.73
TTC39C-203ENST00000540918 PIK3C2AO00443 1686 aa10.51□□□□□ -0.73
TTC39C-203ENST00000540918 CNTNAP5Q8WYK1 1306 aa10.51□□□□□ -0.73
TTC39C-203ENST00000540918 CEP104O60308 925 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms