RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 GOPCQ9HD26 462 aa10.51□□□□□ -0.73
TRAPPC1-202ENST00000540486 MED19A0JLT2 244 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 H3BNC9 293 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 VCPP55072 806 aaKnown RBP10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 SMAD4Q13485 552 aaKnown RBP10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 ZSCAN25Q6NSZ9 544 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 TMCO2Q7Z6W1 182 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 RPAINQ86UA6 219 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 CCDC155Q8N6L0 562 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 PRPF38AQ8NAV1 312 aaKnown RBP10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 CAGE1Q8TC20 777 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 AFAP1L1Q8TED9 768 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 SDR42E1Q8WUS8 393 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 NKD2Q969F2 451 aaPredicted RBP10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 EVI5LQ96CN4 794 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 SEC62Q99442 399 aaKnown RBP10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 SLF1Q9BQI6 1058 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 C17orf80Q9BSJ5 609 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 GVINP1Q7Z2Y8 2422 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 MYH1P12882 1939 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 CHD8Q9HCK8 2581 aa10.5□□□□□ -0.73
TRAPPC1-202ENST00000540486 KMT2BQ9UMN6 2715 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 USP17L21D6R901 530 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 ZBED4O75132 1171 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 MBD4O95243 580 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 CXCL10P02778 98 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 CENPBP07199 599 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 ZFYP08048 801 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 PURAQ00577 322 aaKnown RBP10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 GPM6BQ13491 265 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 EPC2Q52LR7 807 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 FAM47CQ5HY64 1035 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 FAM83BQ5T0W9 1011 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 MCTP2Q6DN12 878 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 DGLUCYQ7Z3D6 616 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 ADSSL1Q8N142 457 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 FAM133AQ8N9E0 248 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 APPBP2Q92624 585 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 MTG1Q9BT17 334 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 KANSL2Q9H9L4 492 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 DCP1AQ9NPI6 582 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 MCM9Q9NXL9 1143 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 CTDP1Q9Y5B0 961 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 DMDP11532 3685 aa10.49□□□□□ -0.73
TRAPPC1-202ENST00000540486 SCN5AQ14524 2016 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 FAM205CA6NFA0 338 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 LOC730098B7Z3J9 87 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 M0R2C6 588 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 EEF2P13639 858 aaKnown RBP10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 SLC4A3P48751 1232 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 CPT1AP50416 773 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 FOSBP53539 338 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 OAZ1P54368 228 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 IKBKEQ14164 716 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 CBX2Q14781 532 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 ZMYM1Q5SVZ6 1142 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 TAPT1Q6NXT6 567 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 CPXCR1Q8N123 301 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 ASIC4Q96FT7 647 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 CNTNAP3BQ96NU0 1288 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 CNTNAP3Q9BZ76 1288 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 CRNKL1Q9BZJ0 848 aaKnown RBP10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 NOD1Q9Y239 953 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 PLXNA3P51805 1871 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 TET1Q8NFU7 2136 aa10.48□□□□□ -0.73
TRAPPC1-202ENST00000540486 COL11A1P12107 1806 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 POTEMA6NI47 508 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 GSG1L2A8MUP6 293 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 KPNA6O60684 536 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 KDM4AO75164 1064 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 CYP2D6P10635 497 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 AKR1B1P15121 316 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 SELPP16109 830 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 HTRA4P83105 476 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 CNTN2Q02246 1040 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 GPNMBQ14956 572 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 DUSP28Q4G0W2 176 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 BRDTQ58F21 947 aaPredicted RBP10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 POTEGQ6S5H5 508 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 SKAP1Q86WV1 359 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 CLEC10AQ8IUN9 316 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 RILPL2Q969X0 211 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 PDGFCQ9NRA1 345 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 CD207Q9UJ71 328 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 SLC4A4Q9Y6R1 1079 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 NCOR2Q9Y618 2525 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 ZFHX4Q86UP3 3567 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 COL4A6Q14031 1691 aa10.47□□□□□ -0.73
TRAPPC1-202ENST00000540486 BAHCC1Q9P281 2608 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 CYP2D7A0A087X1C5 515 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 TRIM6-TRIM34B2RNG4 842 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 PATL2C9JE40 543 aaKnown RBP10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 GPAA1O43292 621 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 RAD21O60216 631 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 EYA4O95677 639 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 MYL3P08590 195 aa10.46□□□□□ -0.73
TRAPPC1-202ENST00000540486 GSPT1P15170 499 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms