RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 EBF2Q9HAK2 575 aa11.4□□□□□ -0.58
GPD2-213ENST00000540309 PCDH11XQ9BZA7 1347 aa11.4□□□□□ -0.58
GPD2-213ENST00000540309 PCDH11YQ9BZA8 1340 aa11.4□□□□□ -0.58
GPD2-213ENST00000540309 PVALEFA0A1B0GWK0 134 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 LIN7AO14910 233 aaPredicted RBP11.39□□□□□ -0.59
GPD2-213ENST00000540309 PHKA1P46020 1223 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 SCTRP47872 440 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 CTSWP56202 376 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 PPP2R5EQ16537 467 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 KCTD16Q68DU8 428 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 PROM2Q8N271 834 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 ACTRT1Q8TDG2 376 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 SEC14L1Q92503 715 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 CCT6BQ92526 530 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 STAMQ92783 540 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 SEC16BQ96JE7 1060 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 BRIP1Q9BX63 1249 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 NDST4Q9H3R1 872 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 ZBTB3Q9H5J0 574 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 TFR2Q9UP52 801 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 PLAAQ9Y263 795 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 A0A0G2JS52 829 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 WNT7AO00755 349 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 ASAP2O43150 1006 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 PPIP5K2O43314 1243 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 ORC4O43929 436 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 SERPING1P05155 500 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 NLRP5P59047 1200 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 SLC9C1Q4G0N8 1177 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 LRCH2Q5VUJ6 765 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 TTC19Q6DKK2 380 aaPredicted RBP11.39□□□□□ -0.59
GPD2-213ENST00000540309 TYW1BQ6NUM6 668 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 GIGYF2Q6Y7W6 1299 aaKnown RBP11.39□□□□□ -0.59
GPD2-213ENST00000540309 KIF6Q6ZMV9 814 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 ANKS4BQ8N8V4 417 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 USP38Q8NB14 1042 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 CASKIN2Q8WXE0 1202 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 BAP1Q92560 729 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 PCMTD1Q96MG8 357 aaPredicted RBP11.39□□□□□ -0.59
GPD2-213ENST00000540309 ARMT1Q9H993 441 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 MLXIPQ9HAP2 919 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 HOMER3Q9NSC5 361 aa11.39□□□□□ -0.59
GPD2-213ENST00000540309 TPX2Q9ULW0 747 aaKnown RBP11.39□□□□□ -0.59
GPD2-213ENST00000540309 FAM153BP0C7A2 387 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 KIF5BP33176 963 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 SEC24CP53992 1094 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 FAM153CQ494X1 144 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 RRP12Q5JTH9 1297 aaKnown RBP11.38□□□□□ -0.59
GPD2-213ENST00000540309 ANKRD40Q6AI12 368 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 PDXDC1Q6P996 788 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 CACNA2D4Q7Z3S7 1137 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 FAM228AQ86W67 206 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 SCFD2Q8WU76 684 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 TRIM9Q9C026 710 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 CCDC134Q9H6E4 229 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 RIC8AQ9NPQ8 531 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 INCENPQ9NQS7 918 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 FAM153AQ9UHL3 310 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 LEMD3Q9Y2U8 911 aa11.38□□□□□ -0.59
GPD2-213ENST00000540309 ZNF142P52746 1687 aaPredicted RBP11.38□□□□□ -0.59
GPD2-213ENST00000540309 M0R2N6 131 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 DNM1LO00429 736 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 A1BGP04217 495 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 MCM7P33993 719 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 PSMD2Q13200 908 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 PIK3AP1Q6ZUJ8 805 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 KRT26Q7Z3Y9 468 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 MAATS1Q7Z4T9 603 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 BLIDQ8IZY5 108 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 GUF1Q8N442 669 aaKnown RBP11.37□□□□□ -0.59
GPD2-213ENST00000540309 CUL5Q93034 780 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 LRRC27Q9C0I9 530 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 SLITRK6Q9H5Y7 841 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 CEP72Q9P209 647 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 PCDHA4Q9UN74 947 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 GOLGA6L10A0A0M3HER8 536 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 PDE8AO60658 829 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 HSD17B3P37058 310 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 MATR3P43243 847 aaKnown RBP eCLIP11.37□□□□□ -0.59
GPD2-213ENST00000540309 CLUL1Q15846 466 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 HGSNATQ68CP4 663 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 APLFQ8IW19 511 aaPredicted RBP11.37□□□□□ -0.59
GPD2-213ENST00000540309 CMTR1Q8N1G2 835 aaKnown RBP11.37□□□□□ -0.59
GPD2-213ENST00000540309 LCORLQ8N3X6 602 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 MTMR8Q96EF0 704 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 ZKSCAN3Q9BRR0 538 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 TCP11L1Q9NUJ3 509 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 MAPK8IP1Q9UQF2 711 aa11.37□□□□□ -0.59
GPD2-213ENST00000540309 CCT8L1PA6NM43 557 aa11.36□□□□□ -0.59
GPD2-213ENST00000540309 ALADP13716 330 aa11.36□□□□□ -0.59
GPD2-213ENST00000540309 GNAQP50148 359 aa11.36□□□□□ -0.59
GPD2-213ENST00000540309 CLNS1AP54105 237 aaKnown RBP11.36□□□□□ -0.59
GPD2-213ENST00000540309 PDE4DQ08499 809 aa11.36□□□□□ -0.59
GPD2-213ENST00000540309 ZNF844Q08AG5 666 aa11.36□□□□□ -0.59
GPD2-213ENST00000540309 GRIK3Q13003 919 aa11.36□□□□□ -0.59
GPD2-213ENST00000540309 RASGRF1Q13972 1273 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms