RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 PLEKHH3Q7Z736 793 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 NBPF11Q86T75 865 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 DPP9Q86TI2 863 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 CCDC144CPQ8IYA2 1237 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 TRIM22Q8IYM9 498 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 CCDC116Q8IYX3 515 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 ANKRD35Q8N283 1001 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 FBXL16Q8N461 479 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 SHCBP1Q8NEM2 672 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 CD99L2Q8TCZ2 262 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 RAET1EQ8TD07 263 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 DDX11Q96FC9 970 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 TCEANC2Q96MN5 208 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 MPHOSPH6Q99547 160 aaKnown RBP7.49□□□□□ -1.21
SNHG1-212ENST00000539975 BACH2Q9BYV9 841 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 UBA5Q9GZZ9 404 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 SPATC1LQ9H0A9 340 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 SLKQ9H2G2 1235 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-212ENST00000539975 SLC38A10Q9HBR0 1119 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 SENP2Q9HC62 589 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 RBPJLQ9UBG7 517 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 BIN2Q9UBW5 565 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-212ENST00000539975 CCPG1Q9ULG6 757 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 TRIM17Q9Y577 477 aa7.49□□□□□ -1.21
SNHG1-212ENST00000539975 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-212ENST00000539975 B4DLN1 442 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 ATP2A1O14983 1001 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 ICAM1P05362 532 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 NR3C2P08235 984 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 ALAS1P13196 640 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 CPA1P15085 419 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 MCM2P49736 904 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 RBM25P49756 843 aaKnown RBP7.48□□□□□ -1.21
SNHG1-212ENST00000539975 MRPL12P52815 198 aaKnown RBP7.48□□□□□ -1.21
SNHG1-212ENST00000539975 APOBRQ0VD83 1088 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 TROAPQ12815 778 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 TMEM132BQ14DG7 1078 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 ZNF787Q6DD87 383 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 TTBK2Q6IQ55 1244 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 CTU1Q7Z7A3 348 aaKnown RBP7.48□□□□□ -1.21
SNHG1-212ENST00000539975 FBXO11Q86XK2 927 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 HOMER1Q86YM7 354 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 MCF2L2Q86YR7 1114 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 RIOX2Q8IUF8 465 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 ADGRF4Q8IZF3 695 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 CCDC82Q8N4S0 544 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 CHST13Q8NET6 341 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 SOCS4Q8WXH5 440 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 ZNF274Q96GC6 653 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-212ENST00000539975 CDK5RAP2Q96SN8 1893 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 MMP19Q99542 508 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 MYL10Q9BUA6 226 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 AMNQ9BXJ7 453 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 ALDH8A1Q9H2A2 487 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-212ENST00000539975 RAVER2Q9HCJ3 691 aaKnown RBP7.48□□□□□ -1.21
SNHG1-212ENST00000539975 ATP13A2Q9NQ11 1180 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 PGPEP1Q9NXJ5 209 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 BTBD7Q9P203 1132 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 MAD2L2Q9UI95 211 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 ADAMTS5Q9UNA0 930 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 MRPL11Q9Y3B7 192 aaKnown RBP7.48□□□□□ -1.21
SNHG1-212ENST00000539975 LAMB1P07942 1786 aa7.48□□□□□ -1.21
SNHG1-212ENST00000539975 PNMA6FA0A0J9YX94 578 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 SLC15A5A6NIM6 579 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 ESPNB1AK53 854 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 ZBTB5O15062 677 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 ZIC2O95409 532 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-212ENST00000539975 XBP1P17861 261 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 ERCC3P19447 782 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 RXRAP19793 462 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 RGS2P41220 211 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 STK3Q13188 491 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 CDC37Q16543 378 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-212ENST00000539975 USH1GQ495M9 461 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
SNHG1-212ENST00000539975 GPR142Q7Z601 462 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 ABRAQ8N0Z2 381 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 CCDC12Q8WUD4 166 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-212ENST00000539975 CUL5Q93034 780 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 TRIM47Q96LD4 638 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 ZSCAN31Q96LW9 406 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-212ENST00000539975 TRERF1Q96PN7 1200 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 SPZ1Q9BXG8 430 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 MOV10L1Q9BXT6 1211 aaKnown RBP7.47□□□□□ -1.21
SNHG1-212ENST00000539975 RANBP17Q9H2T7 1088 aaKnown RBP7.47□□□□□ -1.21
SNHG1-212ENST00000539975 R3HDMLQ9H3Y0 253 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 ACAD9Q9H845 621 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 TXNRD2Q9NNW7 524 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 HOMER2Q9NSB8 354 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 LIMCH1Q9UPQ0 1083 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 PCDHA1Q9Y5I3 950 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 OTOFQ9HC10 1997 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 SIPA1L1O43166 1804 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 ABCB11O95342 1321 aa7.47□□□□□ -1.21
SNHG1-212ENST00000539975 PTPDC1A2A3K4 754 aa7.46□□□□□ -1.22
SNHG1-212ENST00000539975 PDIA3P30101 505 aaKnown RBP7.46□□□□□ -1.22
SNHG1-212ENST00000539975 AK2P54819 239 aa7.46□□□□□ -1.22
SNHG1-212ENST00000539975 SNAP25P60880 206 aa7.46□□□□□ -1.22
SNHG1-212ENST00000539975 UBXN2AP68543 259 aa7.46□□□□□ -1.22
SNHG1-212ENST00000539975 CCT2P78371 535 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms