RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 DPCR1Q3MIW9 517 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 ARMC9Q7Z3E5 817 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 FCHSD1Q86WN1 690 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 CPXCR1Q8N123 301 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 CALML4Q96GE6 196 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 PDLIM2Q96JY6 352 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 CCDC94Q9BW85 323 aaPredicted RBP19.01■□□□□ 0.63
COPS3-212ENST00000539941 HOXC10Q9NYD6 342 aa19.01■□□□□ 0.63
COPS3-212ENST00000539941 LOC285556D6RIA3 1793 aa19■□□□□ 0.63
COPS3-212ENST00000539941 SPDYE5A6NIY4 337 aa19■□□□□ 0.63
COPS3-212ENST00000539941 UNCXA6NJT0 531 aa19■□□□□ 0.63
COPS3-212ENST00000539941 PP2D1A8MPX8 630 aa19■□□□□ 0.63
COPS3-212ENST00000539941 BIN1O00499 593 aa19■□□□□ 0.63
COPS3-212ENST00000539941 CXCL11O14625 94 aa19■□□□□ 0.63
COPS3-212ENST00000539941 GTPBP6O43824 516 aaPredicted RBP19■□□□□ 0.63
COPS3-212ENST00000539941 KIF20AO95235 890 aa19■□□□□ 0.63
COPS3-212ENST00000539941 PRR29P0C7W0 189 aa19■□□□□ 0.63
COPS3-212ENST00000539941 ALAS1P13196 640 aa19■□□□□ 0.63
COPS3-212ENST00000539941 CDC25AP30304 524 aa19■□□□□ 0.63
COPS3-212ENST00000539941 DPYDQ12882 1025 aa19■□□□□ 0.63
COPS3-212ENST00000539941 LUZP1Q86V48 1076 aa19■□□□□ 0.63
COPS3-212ENST00000539941 REPS2Q8NFH8 660 aa19■□□□□ 0.63
COPS3-212ENST00000539941 TBC1D5Q92609 795 aa19■□□□□ 0.63
COPS3-212ENST00000539941 FAM20AQ96MK3 541 aa19■□□□□ 0.63
COPS3-212ENST00000539941 GSDMAQ96QA5 445 aa19■□□□□ 0.63
COPS3-212ENST00000539941 PCDHA12Q9UN75 941 aa19■□□□□ 0.63
COPS3-212ENST00000539941 UQCRHLA0A096LP55 91 aa18.99■□□□□ 0.63
COPS3-212ENST00000539941 UQCRHP07919 91 aa18.99■□□□□ 0.63
COPS3-212ENST00000539941 TTLL12Q14166 644 aaPredicted RBP18.99■□□□□ 0.63
COPS3-212ENST00000539941 TAF3Q5VWG9 929 aa18.99■□□□□ 0.63
COPS3-212ENST00000539941 PROCA1Q8NCQ7 364 aaPredicted RBP18.99■□□□□ 0.63
COPS3-212ENST00000539941 ETNPPLQ8TBG4 499 aa18.99■□□□□ 0.63
COPS3-212ENST00000539941 MAN1B1Q9UKM7 699 aa18.99■□□□□ 0.63
COPS3-212ENST00000539941 A0A0G2JLL6 359 aaPredicted RBP18.98■□□□□ 0.63
COPS3-212ENST00000539941 GOLGA6L19H0YKK7 550 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 ZNF76P36508 570 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 AFMP43652 599 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 FMR1Q06787 632 aaKnown RBP eCLIP18.98■□□□□ 0.63
COPS3-212ENST00000539941 SEMA3FQ13275 785 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 TKFCQ3LXA3 575 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 PRR16Q569H4 304 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 NAALADL2Q58DX5 795 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 KRT79Q5XKE5 535 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 PRRT2Q7Z6L0 340 aaPredicted RBP18.98■□□□□ 0.63
COPS3-212ENST00000539941 GRAMD1CQ8IYS0 662 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 LENG9Q96B70 501 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 MMTAG2Q9BU76 263 aaKnown RBP18.98■□□□□ 0.63
COPS3-212ENST00000539941 DACH1Q9UI36 760 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 R3HCC1Q9Y3T6 440 aaKnown RBP18.98■□□□□ 0.63
COPS3-212ENST00000539941 STK24Q9Y6E0 443 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 RPTORQ8N122 1335 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 A0A0U1RQG5 324 aaPredicted RBP18.98■□□□□ 0.63
COPS3-212ENST00000539941 TMEM88BA6NKF7 163 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 BECN2A8MW95 431 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 FAM86B1E9PN63 330 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 NFIBO00712 420 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 FAM86B2P0C5J1 330 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 PLCG1P19174 1290 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 PPIL2Q13356 520 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 MORC3Q14149 939 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 CT47A1Q5JQC4 288 aaPredicted RBP18.98■□□□□ 0.63
COPS3-212ENST00000539941 MLKLQ8NB16 471 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 TRERF1Q96PN7 1200 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 ELP3Q9H9T3 547 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 KBTBD4Q9NVX7 518 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 STK17AQ9UEE5 414 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 KCNH4Q9UQ05 1017 aa18.98■□□□□ 0.63
COPS3-212ENST00000539941 COL11A1P12107 1806 aaPredicted RBP18.97■□□□□ 0.63
COPS3-212ENST00000539941 A0A087WWV3 80 aa18.97■□□□□ 0.63
COPS3-212ENST00000539941 HOXA7P31268 230 aaPredicted RBP18.97■□□□□ 0.63
COPS3-212ENST00000539941 DHX40Q8IX18 779 aaKnown RBP18.97■□□□□ 0.63
COPS3-212ENST00000539941 FRMPD4Q14CM0 1322 aa18.96■□□□□ 0.63
COPS3-212ENST00000539941 KDM3AQ9Y4C1 1321 aa18.96■□□□□ 0.63
COPS3-212ENST00000539941 IGLV3-22A0A075B6J6 115 aa18.96■□□□□ 0.63
COPS3-212ENST00000539941 POTEMA6NI47 508 aa18.96■□□□□ 0.63
COPS3-212ENST00000539941 SPDYE16A6NNV3 312 aaPredicted RBP18.96■□□□□ 0.63
COPS3-212ENST00000539941 SMTNL1A8MU46 457 aa18.96■□□□□ 0.63
COPS3-212ENST00000539941 SETQ01105 290 aaPredicted RBP18.96■□□□□ 0.63
COPS3-212ENST00000539941 LDLRAD1Q5T700 205 aa18.96■□□□□ 0.63
COPS3-212ENST00000539941 CDK5RAP3Q96JB5 506 aa18.96■□□□□ 0.63
COPS3-212ENST00000539941 TEX13BQ9BXU2 312 aa18.96■□□□□ 0.63
COPS3-212ENST00000539941 RMND1Q9NWS8 449 aa18.96■□□□□ 0.63
COPS3-212ENST00000539941 ZNF214Q9UL59 606 aaPredicted RBP18.96■□□□□ 0.63
COPS3-212ENST00000539941 IRF6O14896 467 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 IKBKBO14920 756 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 CEP55Q53EZ4 464 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 MUM1L1Q5H9M0 696 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 HYIQ5T013 277 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 MB21D1Q8N884 522 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 SYTL5Q8TDW5 730 aaPredicted RBP18.95■□□□□ 0.62
COPS3-212ENST00000539941 SNX29Q8TEQ0 813 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 OTUD5Q96G74 571 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 WNK4Q96J92 1243 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 CLMNQ96JQ2 1002 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 MTRQ99707 1265 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 RNF146Q9NTX7 359 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 AMPD3Q01432 767 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 GRB10Q13322 594 aa18.95■□□□□ 0.62
COPS3-212ENST00000539941 TMEM119Q4V9L6 283 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms