RNA–Protein interactions for RNA: ENST00000539856.5

CWC15-202, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 2

Gene CWC15, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-202ENST00000539856 UBE2Q1Q7Z7E8 422 aa11.76□□□□□ -0.53
CWC15-202ENST00000539856 RNF180Q86T96 592 aa11.76□□□□□ -0.53
CWC15-202ENST00000539856 IL17RAQ96F46 866 aa11.76□□□□□ -0.53
CWC15-202ENST00000539856 ZNF274Q96GC6 653 aaPredicted RBP11.76□□□□□ -0.53
CWC15-202ENST00000539856 C11orf49Q9H6J7 331 aa11.76□□□□□ -0.53
CWC15-202ENST00000539856 SPC25Q9HBM1 224 aa11.76□□□□□ -0.53
CWC15-202ENST00000539856 XPNPEP3Q9NQH7 507 aa11.76□□□□□ -0.53
CWC15-202ENST00000539856 COL20A1Q9P218 1284 aa11.76□□□□□ -0.53
CWC15-202ENST00000539856 DDX49Q9Y6V7 483 aaKnown RBP11.76□□□□□ -0.53
CWC15-202ENST00000539856 FRMPD3Q5JV73 1810 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 KBTBD13C9JR72 458 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 DNM1LO00429 736 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 PRPF3O43395 683 aaKnown RBP11.75□□□□□ -0.53
CWC15-202ENST00000539856 EDNRBP24530 442 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 HOXA13P31271 388 aaPredicted RBP11.75□□□□□ -0.53
CWC15-202ENST00000539856 ADCYAP1R1P41586 468 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
CWC15-202ENST00000539856 FUT2Q10981 343 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 ANKRD1Q15327 319 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 LRRC41Q15345 812 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 STXBP2Q15833 593 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 VARS2Q5ST30 1063 aaKnown RBP11.75□□□□□ -0.53
CWC15-202ENST00000539856 TAPT1Q6NXT6 567 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 FCHSD1Q86WN1 690 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 FBXO16Q8IX29 292 aaPredicted RBP11.75□□□□□ -0.53
CWC15-202ENST00000539856 SMARCC2Q8TAQ2 1214 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 DIS3LQ8TF46 1054 aaKnown RBP11.75□□□□□ -0.53
CWC15-202ENST00000539856 DPF3Q92784 378 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 HS3ST6Q96QI5 342 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 PDGFCQ9NRA1 345 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
CWC15-202ENST00000539856 CNTNAP5Q8WYK1 1306 aa11.75□□□□□ -0.53
CWC15-202ENST00000539856 RBM47A0AV96 593 aaKnown RBP11.74□□□□□ -0.53
CWC15-202ENST00000539856 hCG_1984214I3L0E3 225 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
CWC15-202ENST00000539856 PGK1P00558 417 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 NR3C2P08235 984 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 EIF2AK2P19525 551 aaKnown RBP11.74□□□□□ -0.53
CWC15-202ENST00000539856 NEK4P51957 841 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 CPLX2Q6PUV4 134 aaKnown RBP11.74□□□□□ -0.53
CWC15-202ENST00000539856 HEATR3Q7Z4Q2 680 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 ZNF713Q8N859 430 aaPredicted RBP11.74□□□□□ -0.53
CWC15-202ENST00000539856 C22orf23Q9BZE7 217 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 WDR11Q9BZH6 1224 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 SENP6Q9GZR1 1112 aaPredicted RBP11.74□□□□□ -0.53
CWC15-202ENST00000539856 PSTPIP2Q9H939 334 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 PXMP2Q9NR77 195 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 Q9Y3F1 56 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 NID2Q14112 1375 aa11.74□□□□□ -0.53
CWC15-202ENST00000539856 CENPFP49454 3210 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 PIK3CDO00329 1044 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 CPLX1O14810 134 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 DYNC1LI2O43237 492 aaPredicted RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 ADAMTS4O75173 837 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 C6orf222P0C671 652 aaPredicted RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 COL6A1P12109 1028 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 MYCLP12524 364 aaPredicted RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 IFNAR1P17181 557 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 SMPD1P17405 629 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 AK2P54819 239 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 NAPAP54920 295 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 GJA9P57773 515 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 STK3Q13188 491 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 TTLL4Q14679 1199 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 NTRK3Q16288 839 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 PFKFB3Q16875 520 aaPredicted RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 DUSP28Q4G0W2 176 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 WWC2Q6AWC2 1192 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 USP17L6PQ6QN14 398 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 PCSK9Q8NBP7 692 aaKnown RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 KLHDC9Q8NEP7 349 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 SCFD2Q8WU76 684 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.531e-9■□□□□ 8.2
CWC15-202ENST00000539856 LENG1Q96BZ8 264 aaPredicted RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 PDCD2LQ9BRP1 358 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 TSEN34Q9BSV6 310 aaKnown RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 RNF26Q9BY78 433 aaPredicted RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 AP5M1Q9H0R1 490 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 GLT8D2Q9H1C3 349 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 SLKQ9H2G2 1235 aaPredicted RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 UPF2Q9HAU5 1272 aaKnown RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 SYNRGQ9UMZ2 1314 aa11.73□□□□□ -0.53
CWC15-202ENST00000539856 GNEQ9Y223 722 aaKnown RBP11.73□□□□□ -0.53
CWC15-202ENST00000539856 SMCO2A6NFE2 343 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 MEIS2O14770 477 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 NKRFO15226 690 aaKnown RBP eCLIP11.72□□□□□ -0.53
CWC15-202ENST00000539856 ADCY6O43306 1168 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 SCG2P13521 617 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 SSRP1Q08945 709 aaKnown RBP11.72□□□□□ -0.53
CWC15-202ENST00000539856 PGM5Q15124 567 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 GNASQ5JWF2 1037 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 PPP1R18Q6NYC8 613 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 SEPT14Q6ZU15 432 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 VSIG10LQ86VR7 867 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 TEX2Q8IWB9 1127 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 TRIM22Q8IYM9 498 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 CCDC12Q8WUD4 166 aaPredicted RBP11.72□□□□□ -0.53
CWC15-202ENST00000539856 PHKBQ93100 1093 aa11.72□□□□□ -0.53
CWC15-202ENST00000539856 SLC26A6Q9BXS9 759 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms