RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 USP17L4A6NCW7 530 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 WTIPA6NIX2 430 aaPredicted RBP14.67□□□□□ -0.06
UBE3B-209ENST00000539584 CES2O00748 559 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 ZEB2O60315 1214 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 ZMYND10O75800 440 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 NOP2P46087 812 aaKnown RBP14.67□□□□□ -0.06
UBE3B-209ENST00000539584 NOVP48745 357 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 FKBP3Q00688 224 aaKnown RBP14.67□□□□□ -0.06
UBE3B-209ENST00000539584 EHHADHQ08426 723 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 CALCRLQ16602 461 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 RRAGAQ7L523 313 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 USP17L1Q7RTZ2 530 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 MREGQ8N565 214 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 TBCKQ8TEA7 893 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 CEP63Q96MT8 703 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 SLC39A2Q9NP94 309 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 BLOC1S4Q9NUP1 217 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 DMGDHQ9UI17 866 aaKnown RBP14.67□□□□□ -0.06
UBE3B-209ENST00000539584 IRS2Q9Y4H2 1338 aa14.67□□□□□ -0.06
UBE3B-209ENST00000539584 LRRC53A6NM62 1247 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 MOCS3O95396 460 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 SERPING1P05155 500 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 PLCG2P16885 1265 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 RASA1P20936 1047 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 GRB10Q13322 594 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 HAUS3Q68CZ6 603 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 TADA2BQ86TJ2 420 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 RIN2Q8WYP3 895 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-209ENST00000539584 FAM207AQ9NSI2 230 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-209ENST00000539584 TFCP2L1Q9NZI6 479 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 SPATA31A1Q5TZJ5 1347 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 CNTNAP4Q9C0A0 1308 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 BAZ2BQ9UIF8 2168 aaKnown RBP14.66□□□□□ -0.06
UBE3B-209ENST00000539584 COL5A3P25940 1745 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-209ENST00000539584 SRRM3A6NNA2 597 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-209ENST00000539584 PLEKP08567 350 aaPredicted RBP14.66□□□□□ -0.06
UBE3B-209ENST00000539584 KLRK1P26718 216 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 MARSP56192 900 aaKnown RBP14.66□□□□□ -0.06
UBE3B-209ENST00000539584 PAK2Q13177 524 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 C10orf76Q5T2E6 689 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 KRT79Q5XKE5 535 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 PPP1R18Q6NYC8 613 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 LRRC55Q6ZSA7 311 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 C16orf86Q6ZW13 317 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 B4GALNT4Q76KP1 1039 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 POTEDQ86YR6 584 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 CD302Q8IX05 232 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 RAD54LQ92698 747 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 DYNLL2Q96FJ2 89 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 TLR10Q9BXR5 811 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 RIOX1Q9H6W3 641 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 GDF3Q9NR23 364 aa14.66□□□□□ -0.06
UBE3B-209ENST00000539584 MYMKA6NI61 221 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 HSPA2P54652 639 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 KLHDC7AQ5VTJ3 777 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 PPP4R3AQ6IN85 833 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 TPTE2Q6XPS3 522 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 C15orf52Q6ZUT6 534 aaKnown RBP14.65□□□□□ -0.06
UBE3B-209ENST00000539584 NAP1L4Q99733 375 aaKnown RBP14.65□□□□□ -0.06
UBE3B-209ENST00000539584 MLXIPQ9HAP2 919 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 BMP2KQ9NSY1 1161 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-209ENST00000539584 COL4A3BPQ9Y5P4 624 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 BTNL10A8MVZ5 291 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 TMEM119Q4V9L6 283 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 SFMBT2Q5VUG0 894 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 HGSNATQ68CP4 663 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 NFRKBQ6P4R8 1299 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 MYOCDQ8IZQ8 938 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 SH3RF3Q8TEJ3 882 aaPredicted RBP14.65□□□□□ -0.06
UBE3B-209ENST00000539584 WHAMMQ8TF30 809 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 SETDB2Q96T68 719 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 EYA3Q99504 573 aa14.65□□□□□ -0.06
UBE3B-209ENST00000539584 TXKP42681 527 aa14.64□□□□□ -0.07
UBE3B-209ENST00000539584 NAB2Q15742 525 aa14.64□□□□□ -0.07
UBE3B-209ENST00000539584 RC3H1Q5TC82 1133 aaKnown RBP14.64□□□□□ -0.07
UBE3B-209ENST00000539584 GSPT2Q8IYD1 628 aaKnown RBP14.64□□□□□ -0.07
UBE3B-209ENST00000539584 MARCH10Q8NA82 808 aaPredicted RBP14.64□□□□□ -0.07
UBE3B-209ENST00000539584 BCAS4Q8TDM0 211 aa14.64□□□□□ -0.07
UBE3B-209ENST00000539584 SMCR8Q8TEV9 937 aaPredicted RBP14.64□□□□□ -0.07
UBE3B-209ENST00000539584 GDAP1L1Q96MZ0 367 aa14.64□□□□□ -0.07
UBE3B-209ENST00000539584 PNMA5Q96PV4 448 aa14.64□□□□□ -0.07
UBE3B-209ENST00000539584 NT5C3AQ9H0P0 336 aa14.64□□□□□ -0.07
UBE3B-209ENST00000539584 NARFQ9UHQ1 456 aa14.64□□□□□ -0.07
UBE3B-209ENST00000539584 PCDHGC5Q9Y5F6 944 aa14.64□□□□□ -0.07
UBE3B-209ENST00000539584 ATP8B3O60423 1300 aa14.64□□□□□ -0.07
UBE3B-209ENST00000539584 EPHB6O15197 1021 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 ZCWPW2Q504Y3 356 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 PPP4R3CPQ6ZMV5 832 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 SUGP1Q8IWZ8 645 aaKnown RBP14.63□□□□□ -0.07
UBE3B-209ENST00000539584 IQCKQ8N0W5 287 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 HDAC7Q8WUI4 952 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 EEF2KMTQ96G04 330 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 ACSBG1Q96GR2 724 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 ZNF335Q9H4Z2 1342 aaPredicted RBP14.63□□□□□ -0.07
UBE3B-209ENST00000539584 KDM3AQ9Y4C1 1321 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 COL16A1Q07092 1604 aaPredicted RBP14.63□□□□□ -0.07
UBE3B-209ENST00000539584 GCFC2P16383 781 aaKnown RBP14.63□□□□□ -0.07
UBE3B-209ENST00000539584 ANXA13P27216 316 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 CDK8P49336 464 aa14.63□□□□□ -0.07
UBE3B-209ENST00000539584 GNGT1P63211 74 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms