RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ENOX1Q8TC92 643 aaKnown RBP15.89■□□□□ 0.13
CACNB1-206ENST00000539338 MRPL11Q9Y3B7 192 aaKnown RBP15.89■□□□□ 0.13
CACNB1-206ENST00000539338 NR2E3Q9Y5X4 410 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 PHLPP2Q6ZVD8 1323 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 LAD1O00515 517 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 PRPF6O94906 941 aaKnown RBP15.89■□□□□ 0.13
CACNB1-206ENST00000539338 NR2F2P24468 414 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 ARMCX5Q6P1M9 558 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 BAIAP2L1Q9UHR4 511 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 FEZ2Q9UHY8 353 aaPredicted RBP15.89■□□□□ 0.13
CACNB1-206ENST00000539338 SRPRBQ9Y5M8 271 aaKnown RBP15.89■□□□□ 0.13
CACNB1-206ENST00000539338 TLR3O15455 904 aaKnown RBP15.89■□□□□ 0.13
CACNB1-206ENST00000539338 HUNKP57058 714 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 CUEDC2Q9H467 287 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 DBNDD1Q9H9R9 158 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 MED4Q9NPJ6 270 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 CAPN7Q9Y6W3 813 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 ABCC12Q96J65 1359 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 SPHKAPQ2M3C7 1700 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 MCAMP43121 646 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 LIG4P49917 911 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 GRAPQ13588 217 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 C9orf131Q5VYM1 1079 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 GRAPLQ8TC17 118 aaPredicted RBP15.89■□□□□ 0.13
CACNB1-206ENST00000539338 TEKT3Q9BXF9 490 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 LARSQ9P2J5 1176 aaKnown RBP15.89■□□□□ 0.13
CACNB1-206ENST00000539338 MADDQ8WXG6 1647 aa15.89■□□□□ 0.13
CACNB1-206ENST00000539338 SEMA3EO15041 775 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 ABI1Q8IZP0 508 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 COA1Q9GZY4 146 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 C1orf167Q5SNV9 1468 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 PALM3A6NDB9 673 aaPredicted RBP15.88■□□□□ 0.13
CACNB1-206ENST00000539338 STK10O94804 968 aaKnown RBP15.88■□□□□ 0.13
CACNB1-206ENST00000539338 PAGE5Q96GU1 130 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 PPP1R12CQ9BZL4 782 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 CXCR5P32302 372 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 BSPRYQ5W0U4 402 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 MCTP2Q6DN12 878 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 GOLGA5Q8TBA6 731 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 H7C1W4 665 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 PDE6CP51160 858 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 ABCB5Q2M3G0 1257 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 CCDC62Q6P9F0 684 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 CTAGE3PQ8IX95 158 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 C1orf112Q9NSG2 853 aa15.88■□□□□ 0.13
CACNB1-206ENST00000539338 A0A1B0GUA9 196 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 STK25O00506 426 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 PRPF3O43395 683 aaKnown RBP15.87■□□□□ 0.13
CACNB1-206ENST00000539338 ATF7P17544 494 aaPredicted RBP15.87■□□□□ 0.13
CACNB1-206ENST00000539338 USP17L2Q6R6M4 530 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 TTLL11Q8NHH1 800 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 AK8Q96MA6 479 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 ADD3Q9UEY8 706 aaKnown RBP15.87■□□□□ 0.13
CACNB1-206ENST00000539338 STK38LQ9Y2H1 464 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 LIFRP42702 1097 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 TBC1D10BQ4KMP7 808 aaPredicted RBP15.87■□□□□ 0.13
CACNB1-206ENST00000539338 CACNA2D3Q8IZS8 1091 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 VPS52Q8N1B4 723 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 TAB3Q8N5C8 712 aaPredicted RBP15.87■□□□□ 0.13
CACNB1-206ENST00000539338 KIF28PB7ZC32 967 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 ALDH1A1P00352 501 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 CLNS1AP54105 237 aaKnown RBP15.87■□□□□ 0.13
CACNB1-206ENST00000539338 SNX16P57768 344 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 BIRC2Q13490 618 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 AMNQ9BXJ7 453 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 ZNF341Q9BYN7 854 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 RAB20Q9NX57 234 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 RWDD2AQ9UIY3 292 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 ODF2LQ9ULJ1 636 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 RNF40O75150 1001 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 PLEKHA8P1O95397 391 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 GBP1P32455 592 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 LIG3P49916 1009 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 C2orf54Q08AI8 447 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 DIXDC1Q155Q3 683 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 ASPRV1Q53RT3 343 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 RSAD2Q8WXG1 361 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 PIGBQ92521 554 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 SPTLC3Q9NUV7 552 aa15.87■□□□□ 0.13
CACNB1-206ENST00000539338 I3L4J1 428 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 N4BP1O75113 896 aaKnown RBP15.86■□□□□ 0.13
CACNB1-206ENST00000539338 MAN2A1Q16706 1144 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 METTL13Q8N6R0 699 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 SRP68Q9UHB9 627 aaKnown RBP15.86■□□□□ 0.13
CACNB1-206ENST00000539338 TTLL3Q9Y4R7 772 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 MEIS1O00470 390 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 LGSNQ5TDP6 509 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 FASTKD5Q7L8L6 764 aaKnown RBP15.86■□□□□ 0.13
CACNB1-206ENST00000539338 SDCCAG8Q86SQ7 713 aaPredicted RBP15.86■□□□□ 0.13
CACNB1-206ENST00000539338 CD2APQ9Y5K6 639 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 CLRN2A0PK11 232 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 TTLL1O95922 423 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 TPD52P55327 224 aaPredicted RBP15.86■□□□□ 0.13
CACNB1-206ENST00000539338 PALM2Q8IXS6 379 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 CCDC13Q8IYE1 715 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 STRBPQ96SI9 672 aaKnown RBP15.86■□□□□ 0.13
CACNB1-206ENST00000539338 PARD6BQ9BYG5 372 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 GOLPH3LQ9H4A5 285 aa15.86■□□□□ 0.13
CACNB1-206ENST00000539338 MOCS3O95396 460 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms