RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 PTK7Q13308 1070 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 DGKDQ16760 1214 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 C7orf31Q8N865 590 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 PI4K2BQ8TCG2 481 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 UIMC1Q96RL1 719 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 KATNAL1Q9BW62 490 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 TOMM22Q9NS69 142 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 TCP11L1Q9NUJ3 509 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 CTNNA3Q9UI47 895 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 INSL6Q9Y581 213 aa16.58■□□□□ 0.24
PBX3-212ENST00000538998 GRXCR2A6NFK2 248 aa16.57■□□□□ 0.24
PBX3-212ENST00000538998 IL9P15248 144 aa16.57■□□□□ 0.24
PBX3-212ENST00000538998 ZNF543Q08ER8 600 aa16.57■□□□□ 0.24
PBX3-212ENST00000538998 PTPROQ16827 1216 aa16.57■□□□□ 0.24
PBX3-212ENST00000538998 LY6KQ17RY6 165 aa16.57■□□□□ 0.24
PBX3-212ENST00000538998 TCTN1Q2MV58 587 aa16.57■□□□□ 0.24
PBX3-212ENST00000538998 KCNH6Q9H252 994 aa16.57■□□□□ 0.24
PBX3-212ENST00000538998 HDAC6Q9UBN7 1215 aa16.57■□□□□ 0.24
PBX3-212ENST00000538998 EMSYQ7Z589 1322 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 MRE11P49959 708 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 ALX1Q15699 326 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 USH1GQ495M9 461 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 TIGD5Q53EQ6 642 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 RRP12Q5JTH9 1297 aaKnown RBP16.56■□□□□ 0.24
PBX3-212ENST00000538998 FAM117BQ6P1L5 589 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 SEPT14Q6ZU15 432 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 CHST3Q7LGC8 479 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 NEK9Q8TD19 979 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 NSUN6Q8TEA1 469 aaKnown RBP16.56■□□□□ 0.24
PBX3-212ENST00000538998 EMID1Q96A84 441 aaPredicted RBP16.56■□□□□ 0.24
PBX3-212ENST00000538998 MRPL38Q96DV4 380 aaKnown RBP16.56■□□□□ 0.24
PBX3-212ENST00000538998 C17orf80Q9BSJ5 609 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 FAM50BQ9Y247 325 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 SIP14410 1827 aa16.56■□□□□ 0.24
PBX3-212ENST00000538998 DCXO43602 365 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 LGR5O75473 907 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 AMHP03971 560 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 SNHG28P0DPA3 235 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 PSEN2P49810 448 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 STXBP2Q15833 593 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 GPATCH4Q5T3I0 446 aaKnown RBP16.55■□□□□ 0.24
PBX3-212ENST00000538998 ZNF618Q5T7W0 954 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 VPS53Q5VIR6 699 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 TTC14Q96N46 770 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 SAMD11Q96NU1 681 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 IWS1Q96ST2 819 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
PBX3-212ENST00000538998 F2P00734 622 aa16.54■□□□□ 0.24
PBX3-212ENST00000538998 HTRA4P83105 476 aaPredicted RBP16.54■□□□□ 0.24
PBX3-212ENST00000538998 MFSD10Q14728 455 aa16.54■□□□□ 0.24
PBX3-212ENST00000538998 KIAA0753Q2KHM9 967 aa16.54■□□□□ 0.24
PBX3-212ENST00000538998 TRIM71Q2Q1W2 868 aaKnown RBP16.54■□□□□ 0.24
PBX3-212ENST00000538998 C20orf194Q5TEA3 1177 aa16.54■□□□□ 0.24
PBX3-212ENST00000538998 TRAF7Q6Q0C0 670 aa16.54■□□□□ 0.24
PBX3-212ENST00000538998 PPTC7Q8NI37 304 aa16.54■□□□□ 0.24
PBX3-212ENST00000538998 SP7Q8TDD2 431 aaPredicted RBP16.54■□□□□ 0.24
PBX3-212ENST00000538998 PRKAG3Q9UGI9 489 aa16.54■□□□□ 0.24
PBX3-212ENST00000538998 BRWD1Q9NSI6 2320 aa16.54■□□□□ 0.24
PBX3-212ENST00000538998 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
PBX3-212ENST00000538998 ABCB11O95342 1321 aa16.53■□□□□ 0.24
PBX3-212ENST00000538998 H3BQ06 376 aaPredicted RBP16.53■□□□□ 0.24
PBX3-212ENST00000538998 HAS3O00219 553 aa16.53■□□□□ 0.24
PBX3-212ENST00000538998 NHLH1Q02575 133 aa16.53■□□□□ 0.24
PBX3-212ENST00000538998 LAMC2Q13753 1193 aa16.53■□□□□ 0.24
PBX3-212ENST00000538998 MBTPS1Q14703 1052 aa16.53■□□□□ 0.24
PBX3-212ENST00000538998 MYOCDQ8IZQ8 938 aa16.53■□□□□ 0.24
PBX3-212ENST00000538998 SYTL5Q8TDW5 730 aaPredicted RBP16.53■□□□□ 0.24
PBX3-212ENST00000538998 DDX41Q9UJV9 622 aaKnown RBP16.53■□□□□ 0.24
PBX3-212ENST00000538998 RCAN3Q9UKA8 241 aa16.53■□□□□ 0.24
PBX3-212ENST00000538998 ZMYM6O95789 1325 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 POTEB3A0JP26 581 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 ZNF286BP0CG31 522 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 MX1P20591 662 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
PBX3-212ENST00000538998 EPC2Q52LR7 807 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 POTEBQ6S5H4 581 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.24
PBX3-212ENST00000538998 MCF2L2Q86YR7 1114 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 DHX37Q8IY37 1157 aaKnown RBP16.52■□□□□ 0.24
PBX3-212ENST00000538998 MIER1Q8N108 512 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 BANK1Q8NDB2 785 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 WNT8BQ93098 351 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
PBX3-212ENST00000538998 TAAR1Q96RJ0 339 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 RMDN3Q96TC7 470 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 HELLSQ9NRZ9 838 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 MRVI1Q9Y6F6 885 aa16.52■□□□□ 0.24
PBX3-212ENST00000538998 H3BNC9 293 aa16.51■□□□□ 0.23
PBX3-212ENST00000538998 EIF3JO75822 258 aaKnown RBP16.51■□□□□ 0.23
PBX3-212ENST00000538998 FGAP02671 866 aa16.51■□□□□ 0.23
PBX3-212ENST00000538998 PCP11498 1178 aaKnown RBP16.51■□□□□ 0.23
PBX3-212ENST00000538998 ZP2Q05996 745 aa16.51■□□□□ 0.23
PBX3-212ENST00000538998 COL19A1Q14993 1142 aa16.51■□□□□ 0.23
PBX3-212ENST00000538998 CDC37Q16543 378 aaPredicted RBP16.51■□□□□ 0.23
PBX3-212ENST00000538998 ARHGEF16Q5VV41 709 aa16.51■□□□□ 0.23
PBX3-212ENST00000538998 DBF4BQ8NFT6 615 aa16.51■□□□□ 0.23
PBX3-212ENST00000538998 OTUD7AQ8TE49 926 aaPredicted RBP16.51■□□□□ 0.23
PBX3-212ENST00000538998 FBXL18Q96ME1 805 aa16.51■□□□□ 0.23
PBX3-212ENST00000538998 COL20A1Q9P218 1284 aa16.51■□□□□ 0.23
PBX3-212ENST00000538998 RSPH10B2B2RC85 870 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms