RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 RNF10Q8N5U6 811 aaKnown RBP9.96□□□□□ -0.82
SNHG1-209ENST00000538654 STK32AQ8WU08 396 aa9.96□□□□□ -0.82
SNHG1-209ENST00000538654 NUP133Q8WUM0 1156 aa9.96□□□□□ -0.82
SNHG1-209ENST00000538654 ERGIC2Q96RQ1 377 aa9.96□□□□□ -0.82
SNHG1-209ENST00000538654 UBAC1Q9BSL1 405 aa9.96□□□□□ -0.82
SNHG1-209ENST00000538654 GDAQ9Y2T3 454 aa9.96□□□□□ -0.82
SNHG1-209ENST00000538654 CAPN6Q9Y6Q1 641 aa9.96□□□□□ -0.82
SNHG1-209ENST00000538654 UQCRFS1P1P0C7P4 283 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 KCNA6P17658 529 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 STAT6P42226 847 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 MARSP56192 900 aaKnown RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 IFIT5Q13325 482 aaKnown RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 BIRC3Q13489 604 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 ZKSCAN8Q15776 578 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 AMHR2Q16671 573 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 C10orf62Q5T681 223 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 DCAF8Q5TAQ9 597 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 NFRKBQ6P4R8 1299 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 RUFY4Q6ZNE9 571 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 NLRP7Q8WX94 980 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 CCDC47Q96A33 483 aaKnown RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 RSRC1Q96IZ7 334 aaKnown RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 CCDC85AQ96PX6 553 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 HINFPQ9BQA5 517 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 INO80BQ9C086 356 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 BATF3Q9NR55 127 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 DDX20Q9UHI6 824 aaKnown RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 NFU1Q9UMS0 254 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 TCRBV5S4A2TA0A5A2 114 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 GCOM1H8Y6P7 765 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 PJA2O43164 708 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 HEXIM1O94992 359 aaKnown RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 MOCS3O95396 460 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 MYZAPP0CAP1 466 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 GHRP10912 638 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 SEC24CP53992 1094 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 XRCC4Q13426 336 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 PPP2R5AQ15172 486 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 ANKRD20A8PQ5CZ79 823 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 CACNA2D3Q8IZS8 1091 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 FAM212AQ96EL1 285 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 FAXDC2Q96IV6 333 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 NOX5Q96PH1 765 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 MTRQ99707 1265 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 TMBIM4Q9HC24 238 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 EPB41L5Q9HCM4 733 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 PLCB1Q9NQ66 1216 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 RBM12Q9NTZ6 932 aaKnown RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 BIN2Q9UBW5 565 aaPredicted RBP9.95□□□□□ -0.82
SNHG1-209ENST00000538654 PLAGL2Q9UPG8 496 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 MAPK8IP1Q9UQF2 711 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 MYH10P35580 1976 aa9.95□□□□□ -0.82
SNHG1-209ENST00000538654 TRIM49BA6NDI0 452 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 FAM205CA6NFA0 338 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 NEBLO76041 1014 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 HSPA9P38646 679 aaKnown RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 KIF11P52732 1056 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 PUS10Q3MIT2 529 aaKnown RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 RRP12Q5JTH9 1297 aaKnown RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 METTL24Q5JXM2 366 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 RCSD1Q6JBY9 416 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 MAATS1Q7Z4T9 603 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 NOP9Q86U38 636 aaKnown RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 CSGALNACT2Q8N6G5 542 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 IFT81Q8WYA0 676 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 SCLT1Q96NL6 688 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 LUC7LQ9NQ29 371 aaKnown RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 PIH1D3Q9NQM4 214 aaKnown RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 TCEAL9Q9UHQ7 104 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 TRAPPC3O43617 180 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 AKR1B10O60218 316 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 DNAJC8O75937 253 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 GBP2P32456 591 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 CARSP49589 748 aaKnown RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 GUCY2DQ02846 1103 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 SLMAPQ14BN4 828 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 TTI2Q6NXR4 508 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 ZSCAN29Q8IWY8 852 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 CACTIN-AS1Q8N1I8 211 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 GIMAP8Q8ND71 665 aaPredicted RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 LRRC45Q96CN5 670 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 HOOK2Q96ED9 719 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 PLA2G12BQ9BX93 195 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 MLXIPQ9HAP2 919 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 SPC25Q9HBM1 224 aa9.94□□□□□ -0.82
SNHG1-209ENST00000538654 PPANQ9NQ55 473 aaKnown RBP9.94□□□□□ -0.82
SNHG1-209ENST00000538654 C5orf60A6NFR6 353 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 ZNF263O14978 683 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 RHOBTB3O94955 611 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 GLI1P08151 1106 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 CALM1P0DP23 149 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 CALM2P0DP24 149 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 CALM3P0DP25 149 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 MTIF2P46199 727 aaKnown RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 TNNC1P63316 161 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 MAP3K12Q12852 859 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 PKN1Q16512 942 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 TLDC1Q6P9B6 456 aa9.93□□□□□ -0.82
SNHG1-209ENST00000538654 CMTR1Q8N1G2 835 aaKnown RBP9.93□□□□□ -0.82
SNHG1-209ENST00000538654 SMCR8Q8TEV9 937 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms