RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 PAK1Q13153 545 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 GRM3Q14832 879 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 TESK1Q15569 626 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 ARHGAP29Q52LW3 1261 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 COBLL1Q53SF7 1204 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 ZFYVE27Q5T4F4 411 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 ACAD11Q709F0 780 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 EDARADDQ8WWZ3 215 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 SLC5A5Q92911 643 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 AIFM3Q96NN9 605 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 ALG1Q9BT22 464 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 GPRC5CQ9NQ84 441 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 PNMA2Q9UL42 364 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 DAAM1Q9Y4D1 1078 aa11.16□□□□□ -0.62
CD9-207ENST00000538418 PTPDC1A2A3K4 754 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 SIGLEC6O43699 453 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 MSCO60682 206 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 LRRN2O75325 713 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 VCAM1P19320 739 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 ODF1Q14990 250 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 SAFBQ15424 915 aaKnown RBP eCLIP11.15□□□□□ -0.62
CD9-207ENST00000538418 LBX2Q6XYB7 198 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 TMC3Q7Z5M5 1100 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 CMTR2Q8IYT2 770 aaKnown RBP11.15□□□□□ -0.62
CD9-207ENST00000538418 C2CD4AQ8NCU7 369 aaPredicted RBP11.15□□□□□ -0.62
CD9-207ENST00000538418 PPM1EQ8WY54 764 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 HSPBAP1Q96EW2 488 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 BTBD6Q96KE9 485 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 SCYL1Q96KG9 808 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 STRBPQ96SI9 672 aaKnown RBP11.15□□□□□ -0.62
CD9-207ENST00000538418 CHST7Q9NS84 486 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 TMEFF2Q9UIK5 374 aaPredicted RBP11.15□□□□□ -0.62
CD9-207ENST00000538418 MRFAP1Q9Y605 127 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 ABCA9Q8IUA7 1624 aa11.15□□□□□ -0.62
CD9-207ENST00000538418 STXBP3O00186 592 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 DDB1Q16531 1140 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 OVCH1Q7RTY7 1134 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 PODNQ7Z5L7 613 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 MORC1Q86VD1 984 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 FBXO11Q86XK2 927 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 GALNT6Q8NCL4 622 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 LRGUKQ96M69 825 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 NUP88Q99567 741 aaPredicted RBP11.14□□□□□ -0.63
CD9-207ENST00000538418 MAN1C1Q9NR34 630 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 MKS1Q9NXB0 559 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 BACE2Q9Y5Z0 518 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
CD9-207ENST00000538418 FRMPD2Q68DX3 1309 aaPredicted RBP11.13□□□□□ -0.63
CD9-207ENST00000538418 ARNTLO00327 626 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 AURKAO14965 403 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 FGAP02671 866 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 LTBRP36941 435 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 FAM47CQ5HY64 1035 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 E4F1Q66K89 784 aaPredicted RBP11.13□□□□□ -0.63
CD9-207ENST00000538418 TTC17Q96AE7 1141 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 ACDQ96AP0 544 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 PPCSQ9HAB8 311 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 PTPRHQ9HD43 1115 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 ATG3Q9NT62 314 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 TERF2IPQ9NYB0 399 aa11.13□□□□□ -0.63
CD9-207ENST00000538418 HECW2Q9P2P5 1572 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.12□□□□□ -0.63
CD9-207ENST00000538418 C2orf71A6NGG8 1288 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 MEIS1O00470 390 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 APAF1O14727 1248 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 NRDCO43847 1150 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 PRAMEF1O95521 474 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 SOD2P04179 222 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 GSNP06396 782 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 ASGR2P07307 311 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 CD3EP07766 207 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 INO80DQ53TQ3 878 aaPredicted RBP11.12□□□□□ -0.63
CD9-207ENST00000538418 TRAPPC3LQ5T215 181 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 GPR158Q5T848 1215 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 CWF19L1Q69YN2 538 aaKnown RBP11.12□□□□□ -0.63
CD9-207ENST00000538418 FDX2Q6P4F2 183 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 ELAC2Q9BQ52 826 aaKnown RBP11.12□□□□□ -0.63
CD9-207ENST00000538418 H2AFY2Q9P0M6 372 aaPredicted RBP11.12□□□□□ -0.63
CD9-207ENST00000538418 DDX20Q9UHI6 824 aaKnown RBP11.12□□□□□ -0.63
CD9-207ENST00000538418 SAP30BPQ9UHR5 308 aaKnown RBP11.12□□□□□ -0.63
CD9-207ENST00000538418 MINPP1Q9UNW1 487 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 FAM50BQ9Y247 325 aa11.12□□□□□ -0.63
CD9-207ENST00000538418 NUP153P49790 1475 aaKnown RBP11.12□□□□□ -0.63
CD9-207ENST00000538418 FHOD3Q2V2M9 1422 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 RAPGEF6Q8TEU7 1601 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 PCDHGA12O60330 932 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 IL33O95760 270 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 DNM2P50570 870 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 SRSF11Q05519 484 aaKnown RBP11.11□□□□□ -0.63
CD9-207ENST00000538418 RAPGEF1Q13905 1077 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 KIZQ2M2Z5 673 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 BROXQ5VW32 411 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 CREB3L3Q68CJ9 461 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
CD9-207ENST00000538418 CCDC103Q8IW40 242 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 EFHBQ8N7U6 833 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 ACSS3Q9H6R3 686 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 OXSMQ9NWU1 459 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 ZNF652Q9Y2D9 606 aa11.11□□□□□ -0.63
CD9-207ENST00000538418 PCDHGA9Q9Y5G4 932 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms