RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 TBC1D7Q9P0N9 293 aa15.64■□□□□ 0.09
CLPB-209ENST00000538039 ROBO1Q9Y6N7 1651 aa15.64■□□□□ 0.09
CLPB-209ENST00000538039 STRCQ7RTU9 1775 aa15.63■□□□□ 0.09
CLPB-209ENST00000538039 SPA17Q15506 151 aa15.63■□□□□ 0.09
CLPB-209ENST00000538039 ZNF572Q7Z3I7 529 aaPredicted RBP15.63■□□□□ 0.09
CLPB-209ENST00000538039 GOLPH3Q9H4A6 298 aa15.63■□□□□ 0.09
CLPB-209ENST00000538039 CACNB1Q02641 598 aaPredicted RBP15.63■□□□□ 0.09
CLPB-209ENST00000538039 MAP9Q49MG5 647 aa15.63■□□□□ 0.09
CLPB-209ENST00000538039 TRIM58Q8NG06 486 aa15.63■□□□□ 0.09
CLPB-209ENST00000538039 FAM76AQ8TAV0 307 aa15.63■□□□□ 0.09
CLPB-209ENST00000538039 NOC3LQ8WTT2 800 aaKnown RBP15.63■□□□□ 0.09
CLPB-209ENST00000538039 PIK3R5Q8WYR1 880 aa15.63■□□□□ 0.09
CLPB-209ENST00000538039 BICDL2A1A5D9 508 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 FTCDO95954 541 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 MYL1P05976 194 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 NONOQ15233 471 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLPB-209ENST00000538039 NEK8Q86SG6 692 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 DHX37Q8IY37 1157 aaKnown RBP15.62■□□□□ 0.09
CLPB-209ENST00000538039 EHBP1Q8NDI1 1231 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 RPGRIP1Q96KN7 1286 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 ZIM3Q96PE6 472 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 DDX60LQ5H9U9 1706 aaKnown RBP15.62■□□□□ 0.09
CLPB-209ENST00000538039 NPHP3-ACAD11A0A0J9YXS1 232 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 AKR1B10O60218 316 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 ATP1A2P50993 1020 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 ENOX2Q16206 610 aaKnown RBP15.62■□□□□ 0.09
CLPB-209ENST00000538039 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
CLPB-209ENST00000538039 CEP95Q96GE4 821 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 FAM170AA1A519 330 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 TULP1O00294 542 aaPredicted RBP15.62■□□□□ 0.09
CLPB-209ENST00000538039 MAGEA1P43355 309 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 PDCLQ13371 301 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 SLC10A5Q5PT55 438 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 DDX12PQ92771 950 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 ACBD3Q9H3P7 528 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 BCAS3Q9H6U6 928 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 NFU1Q9UMS0 254 aa15.62■□□□□ 0.09
CLPB-209ENST00000538039 SBF2Q86WG5 1849 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 CDK5RAP2Q96SN8 1893 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 ZNF233A6NK53 670 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 TACC1O75410 805 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 IPO7O95373 1038 aaKnown RBP15.61■□□□□ 0.09
CLPB-209ENST00000538039 CDK8P49336 464 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 CLEC4GQ6UXB4 293 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 ZNF444Q8N0Y2 327 aaPredicted RBP15.61■□□□□ 0.09
CLPB-209ENST00000538039 FNBP4Q8N3X1 1017 aaPredicted RBP15.61■□□□□ 0.09
CLPB-209ENST00000538039 WNK3Q9BYP7 1800 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 EIF6P56537 245 aaKnown RBP15.61■□□□□ 0.09
CLPB-209ENST00000538039 GNGT1P63211 74 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 EHHADHQ08426 723 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 PDXDC1Q6P996 788 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 STIM2Q9P246 746 aa15.61■□□□□ 0.09
CLPB-209ENST00000538039 SPATA31A1Q5TZJ5 1347 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 LAD1O00515 517 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 KLRC1P26715 233 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 LIG3P49916 1009 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 ARID5AQ03989 594 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 AK8Q96MA6 479 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 DEF6Q9H4E7 631 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 PPP1R11O60927 126 aaPredicted RBP15.6■□□□□ 0.09
CLPB-209ENST00000538039 PALMO75781 387 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 LDHBP07195 334 aaKnown RBP15.6■□□□□ 0.09
CLPB-209ENST00000538039 UBE2SQ16763 222 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 CNNM4Q6P4Q7 775 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 SV2BQ7L1I2 683 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 BCAS4Q8TDM0 211 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 LARP4BQ92615 738 aaKnown RBP15.6■□□□□ 0.09
CLPB-209ENST00000538039 CAPS2Q9BXY5 557 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 LRRC4CQ9HCJ2 640 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 ZNF652Q9Y2D9 606 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 ROBO3Q96MS0 1386 aa15.6■□□□□ 0.09
CLPB-209ENST00000538039 COL14A1Q05707 1796 aaKnown RBP15.59■□□□□ 0.09
CLPB-209ENST00000538039 GUCY2FP51841 1108 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 MAN2A1Q16706 1144 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 AMOTL1Q8IY63 956 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 GOLGA6L1Q8N7Z2 621 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 EYA3Q99504 573 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 RTFDC1Q9BY42 306 aaPredicted RBP15.59■□□□□ 0.09
CLPB-209ENST00000538039 COL5A3P25940 1745 aaPredicted RBP15.59■□□□□ 0.09
CLPB-209ENST00000538039 UNC13DQ70J99 1090 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 DNAJC19Q96DA6 116 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 SPZ1Q9BXG8 430 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 CUEDC2Q9H467 287 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 HYOU1Q9Y4L1 999 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 A0A087X0T9 212 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 EIF3HO15372 352 aaKnown RBP eCLIP15.59■□□□□ 0.09
CLPB-209ENST00000538039 PJA2O43164 708 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 FAM228BP0C875 321 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 PRLRP16471 622 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 MCM3P25205 808 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 KRT25Q7Z3Z0 450 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 FAM114A1Q8IWE2 563 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 IFT81Q8WYA0 676 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 HAS1Q92839 578 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 EPB41L5Q9HCM4 733 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 FAM169AQ9Y6X4 670 aa15.59■□□□□ 0.09
CLPB-209ENST00000538039 USO1O60763 962 aaKnown RBP15.58■□□□□ 0.08
CLPB-209ENST00000538039 CALCRLQ16602 461 aa15.58■□□□□ 0.08
CLPB-209ENST00000538039 ZCWPW2Q504Y3 356 aa15.58■□□□□ 0.08
CLPB-209ENST00000538039 CHADLQ6NUI6 762 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms