RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 C7orf31Q8N865 590 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 PRSS33Q8NF86 280 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 HDAC6Q9UBN7 1215 aa13.17□□□□□ -0.3
CLPB-208ENST00000538021 LGR5O75473 907 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
CLPB-208ENST00000538021 PTPN5P54829 565 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
CLPB-208ENST00000538021 PPARAQ07869 468 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 RBL2Q08999 1139 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 ZNF618Q5T7W0 954 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 SYDE2Q5VT97 1194 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 KBTBD3Q8NAB2 608 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 CLEC4DQ8WXI8 215 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 KAT2BQ92831 832 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 SAMD11Q96NU1 681 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 ALG1Q9BT22 464 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 NAPBQ9H115 298 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 NSUN3Q9H649 340 aaKnown RBP13.16□□□□□ -0.3
CLPB-208ENST00000538021 GTF2IRD1Q9UHL9 959 aa13.16□□□□□ -0.3
CLPB-208ENST00000538021 B4DLN1 442 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 H3BNC9 293 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 SMARCA5O60264 1052 aaPredicted RBP13.15□□□□□ -0.3
CLPB-208ENST00000538021 GH1P01241 217 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 EDNRBP24530 442 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
CLPB-208ENST00000538021 HTRA4P83105 476 aaPredicted RBP13.15□□□□□ -0.3
CLPB-208ENST00000538021 LY6KQ17RY6 165 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 HERC4Q5GLZ8 1057 aaPredicted RBP13.15□□□□□ -0.3
CLPB-208ENST00000538021 IER5LQ5T953 404 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 SEPT14Q6ZU15 432 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 RPAINQ86UA6 219 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 DBF4BQ8NFT6 615 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 DCAF4Q8WV16 495 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 YME1L1Q96TA2 773 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 POP1Q99575 1024 aaKnown RBP13.15□□□□□ -0.3
CLPB-208ENST00000538021 GPCPD1Q9NPB8 672 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 IL17RBQ9NRM6 502 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 ECHDC1Q9NTX5 307 aa13.15□□□□□ -0.3
CLPB-208ENST00000538021 FRMPD2Q68DX3 1309 aaPredicted RBP13.14□□□□□ -0.31
CLPB-208ENST00000538021 UPP2O95045 317 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 PSEN2P49810 448 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 ARHGAP1Q07960 439 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 PTK7Q13308 1070 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 MBTPS1Q14703 1052 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 DGKDQ16760 1214 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 TRAF7Q6Q0C0 670 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 TMEM192Q8IY95 271 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 DNERQ8NFT8 737 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 SP7Q8TDD2 431 aaPredicted RBP13.14□□□□□ -0.31
CLPB-208ENST00000538021 WNT8BQ93098 351 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 PBXIP1Q96AQ6 731 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 LRRCC1Q9C099 1032 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 INCENPQ9NQS7 918 aa13.14□□□□□ -0.31
CLPB-208ENST00000538021 RANBP6O60518 1105 aaKnown RBP13.13□□□□□ -0.31
CLPB-208ENST00000538021 ZFYP08048 801 aaPredicted RBP13.13□□□□□ -0.31
CLPB-208ENST00000538021 LTBRP36941 435 aa13.13□□□□□ -0.31
CLPB-208ENST00000538021 ZNF200P98182 395 aaPredicted RBP13.13□□□□□ -0.31
CLPB-208ENST00000538021 CTDSPL2Q05D32 466 aa13.13□□□□□ -0.31
CLPB-208ENST00000538021 SMAD2Q15796 467 aaKnown RBP13.13□□□□□ -0.31
CLPB-208ENST00000538021 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
CLPB-208ENST00000538021 CCDC62Q6P9F0 684 aa13.13□□□□□ -0.31
CLPB-208ENST00000538021 BTNL9Q6UXG8 535 aa13.13□□□□□ -0.31
CLPB-208ENST00000538021 FBXO11Q86XK2 927 aa13.13□□□□□ -0.31
CLPB-208ENST00000538021 DHX37Q8IY37 1157 aaKnown RBP13.13□□□□□ -0.31
CLPB-208ENST00000538021 EDAQ92838 391 aa13.13□□□□□ -0.31
CLPB-208ENST00000538021 SEC62Q99442 399 aaKnown RBP13.13□□□□□ -0.31
CLPB-208ENST00000538021 KATNAL1Q9BW62 490 aa13.13□□□□□ -0.31
CLPB-208ENST00000538021 MYO15AQ9UKN7 3530 aa13.13□□□□□ -0.31
CLPB-208ENST00000538021 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
CLPB-208ENST00000538021 MICAL3Q7RTP6 2002 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 TMEM221A6NGB7 291 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 RSPH10B2B2RC85 870 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 M0R296 226 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 STXBP3O00186 592 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 MBTPS2O43462 519 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 NCK2O43639 380 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 GFRA3O60609 400 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 CSPG5O95196 566 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 RSPH10BP0C881 870 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 ZNF286BP0CG31 522 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 THPOP40225 353 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 DLX2Q07687 328 aaPredicted RBP13.12□□□□□ -0.31
CLPB-208ENST00000538021 MFSD10Q14728 455 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 COL19A1Q14993 1142 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 KIAA0753Q2KHM9 967 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 TSHZ3Q63HK5 1081 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 SUGP1Q8IWZ8 645 aaKnown RBP13.12□□□□□ -0.31
CLPB-208ENST00000538021 PRRX2Q99811 253 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 TECTAO75443 2155 aa13.12□□□□□ -0.31
CLPB-208ENST00000538021 MYO7AQ13402 2215 aa13.11□□□□□ -0.31
CLPB-208ENST00000538021 CTNNB1P35222 781 aa13.11□□□□□ -0.31
CLPB-208ENST00000538021 TCF15Q12870 199 aa13.11□□□□□ -0.31
CLPB-208ENST00000538021 USH1GQ495M9 461 aa13.11□□□□□ -0.31
CLPB-208ENST00000538021 TRIM67Q6ZTA4 783 aa13.11□□□□□ -0.31
CLPB-208ENST00000538021 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
CLPB-208ENST00000538021 FAM86C1Q9NVL1 165 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms