RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	CD8B	P10966	210 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	PML	P29590	882 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	TMPRSS15	P98073	1019 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	STAT4	Q14765	748 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	SLC14A2	Q15849	920 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	BRDT	Q58F21	947 aa	Predicted RBP	7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	RALGPS1	Q5JS13	557 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	PANK1	Q8TE04	598 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	DPF3	Q92784	378 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	JMJD8	Q96S16	334 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	JAM3	Q9BX67	310 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	LMCD1	Q9NZU5	365 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	ZNF281	Q9Y2X9	895 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	RWDD3	Q9Y3V2	267 aa		7.39	□□□□□ -1.23
PRKDC-208	ENST00000536710	FADS2P1	A8MWK0	482 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	NEMP1	O14524	444 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	MARCH6	O60337	910 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	FUCA1	P04066	466 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	GNAT1	P11488	350 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	KRT15	P19012	456 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	FPR2	P25090	351 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	HK2	P52789	917 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	RTP1	P59025	263 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	CRY1	Q16526	586 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	ODR4	Q5SWX8	454 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	LHFPL2	Q6ZUX7	228 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	C16orf59	Q7L2K0	433 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	NLRP10	Q86W26	655 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	C2orf69	Q8N8R5	385 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	CHST14	Q8NCH0	376 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	GPR101	Q96P66	508 aa	Predicted RBP	7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	ALPK1	Q96QP1	1244 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	G6PC3	Q9BUM1	346 aa		7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710	COA3	Q9Y2R0	106 aa	Predicted RBP	7.38	□□□□□ -1.23
PRKDC-208	ENST00000536710		A0A1W2PQ45	241 aa	Predicted RBP	7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710		A0A1W2PQJ5	194 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710		A0A1W2PQY0	241 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	C22orf46	C9J442	243 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710		H7BY64	318 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	F2	P00734	622 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	ZGLP1	P0C6A0	271 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	KIR2DL1	P43626	348 aa	Predicted RBP	7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	KIR2DL2	P43627	348 aa	Predicted RBP	7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	ID4	P47928	161 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	EXOSC10	Q01780	885 aa	Known RBP	7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	RNF219	Q5W0B1	726 aa	Predicted RBP	7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	SPRED2	Q7Z698	418 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	KIF18B	Q86Y91	864 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	LINC01599	Q8WXQ3	324 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	PRDM7	Q9NQW5	492 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	THG1L	Q9NWX6	298 aa	Known RBP	7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	SLC5A4	Q9NY91	659 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	EBF1	Q9UH73	591 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	TMEM59L	Q9UK28	342 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	CBLC	Q9ULV8	474 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	TAF6L	Q9Y6J9	622 aa		7.37	□□□□□ -1.23
PRKDC-208	ENST00000536710	PTPDC1	A2A3K4	754 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	TRAF5	O00463	557 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	WNT9A	O14904	365 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	GPR39	O43194	453 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	ZEB2	O60315	1214 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	KATNA1	O75449	491 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	KRT37	O76014	449 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	IGHA1	P01876	353 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	COL6A2	P12110	1019 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	TACR1	P25103	407 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	EP400NL	Q6ZTU2	488 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	OVCH1	Q7RTY7	1134 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	SLCO6A1	Q86UG4	719 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	SPATS2	Q86XZ4	545 aa	Known RBP	7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	LZTR1	Q8N653	840 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	FLCN	Q8NFG4	579 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	JDP2	Q8WYK2	163 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	MTMR8	Q96EF0	704 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	IMPACT	Q9P2X3	320 aa		7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	ANGEL1	Q9UNK9	670 aa	Known RBP	7.36	□□□□□ -1.23
PRKDC-208	ENST00000536710	WASHC2C	Q9Y4E1	1318 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	DGKI	O75912	1065 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	FKBP9	O95302	570 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	PDE6A	P16499	860 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	BPI	P17213	487 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	SSTR4	P31391	388 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	ADCYAP1R1	P41586	468 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	CEBPA	P49715	358 aa	Predicted RBP	7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	RBM10	P98175	930 aa	Known RBP	7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	DSG1	Q02413	1049 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	ITK	Q08881	620 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	SPIRE1	Q08AE8	756 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	HSF5	Q4G112	596 aa	Predicted RBP	7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	FKBP9P1	Q75LS8	142 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	C11orf74	Q86VG3	221 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	VSIG10L	Q86VR7	867 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	OSTM1	Q86WC4	334 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	OXR1	Q8N573	874 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	ANKS4B	Q8N8V4	417 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	SMC1B	Q8NDV3	1235 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	NUP43	Q8NFH3	380 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	ORAI3	Q9BRQ5	295 aa		7.35	□□□□□ -1.23
PRKDC-208	ENST00000536710	CDIP1	Q9H305	208 aa		7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 9 ms