RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 NID2Q14112 1375 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 EIF3JO75822 258 aaKnown RBP15.17■□□□□ 0.02
PRKDC-206ENST00000536429 ITGB8P26012 769 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 PDIA3P30101 505 aaKnown RBP15.17■□□□□ 0.02
PRKDC-206ENST00000536429 CDK7P50613 346 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 PSMC6P62333 389 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 MDM2Q00987 491 aaPredicted RBP15.17■□□□□ 0.02
PRKDC-206ENST00000536429 TTLL4Q14679 1199 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 PPP1R13LQ8WUF5 828 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 VTI1AQ96AJ9 217 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 TM6SF1Q9BZW5 370 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 PSTPIP2Q9H939 334 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 NCOA5Q9HCD5 579 aaKnown RBP15.17■□□□□ 0.02
PRKDC-206ENST00000536429 DDX41Q9UJV9 622 aaKnown RBP15.17■□□□□ 0.02
PRKDC-206ENST00000536429 CYP46A1Q9Y6A2 500 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 ELP1O95163 1332 aa15.17■□□□□ 0.02
PRKDC-206ENST00000536429 STXBP3O00186 592 aa15.16■□□□□ 0.02
PRKDC-206ENST00000536429 PIK3CDO00329 1044 aa15.16■□□□□ 0.02
PRKDC-206ENST00000536429 SORBS3O60504 671 aa15.16■□□□□ 0.02
PRKDC-206ENST00000536429 EVCP57679 992 aa15.16■□□□□ 0.02
PRKDC-206ENST00000536429 CCT2P78371 535 aaKnown RBP15.16■□□□□ 0.02
PRKDC-206ENST00000536429 MRPS9P82933 396 aaKnown RBP15.16■□□□□ 0.02
PRKDC-206ENST00000536429 ARHGAP1Q07960 439 aa15.16■□□□□ 0.02
PRKDC-206ENST00000536429 SMARCC2Q8TAQ2 1214 aa15.16■□□□□ 0.02
PRKDC-206ENST00000536429 PHKBQ93100 1093 aa15.16■□□□□ 0.02
PRKDC-206ENST00000536429 A0A0U1RQG5 324 aaPredicted RBP15.15■□□□□ 0.02
PRKDC-206ENST00000536429 ARVCFO00192 962 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 ADAMTS3O15072 1205 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 NKRFO15226 690 aaKnown RBP eCLIP15.15■□□□□ 0.02
PRKDC-206ENST00000536429 ZEB2O60315 1214 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 MYL3P08590 195 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 CCND2P30279 289 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 PURAQ00577 322 aaKnown RBP15.15■□□□□ 0.02
PRKDC-206ENST00000536429 SP2Q02086 613 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 FAAP100Q0VG06 881 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 NTRK3Q16288 839 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 ANKRD33Q7Z3H0 272 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 SLC43A3Q8NBI5 491 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 AFG1LQ8WV93 481 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 CUL5Q93034 780 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 BCAS3Q9H6U6 928 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 PDRG1Q9NUG6 133 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 RTEL1Q9NZ71 1219 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 MRVI1Q9Y6F6 885 aa15.15■□□□□ 0.02
PRKDC-206ENST00000536429 LAMA2P24043 3122 aaKnown RBP15.15■□□□□ 0.02
PRKDC-206ENST00000536429 A6NJR5 290 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 GH1P01241 217 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 CLTBP09497 229 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 CPT1AP50416 773 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 NAPAP54920 295 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 SEMA3FQ13275 785 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 ITGA7Q13683 1181 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 PKN1Q16512 942 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 PGBD1Q96JS3 809 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 TOX2Q96NM4 488 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 BARHL2Q9NY43 387 aa15.14■□□□□ 0.01
PRKDC-206ENST00000536429 CCDC196A0A1B0GTZ2 297 aa15.13■□□□□ 0.01
PRKDC-206ENST00000536429 DTNBO60941 627 aa15.13■□□□□ 0.01
PRKDC-206ENST00000536429 CABYRO75952 493 aa15.13■□□□□ 0.01
PRKDC-206ENST00000536429 MMP3P08254 477 aa15.13■□□□□ 0.01
PRKDC-206ENST00000536429 UBA1P22314 1058 aaKnown RBP15.13■□□□□ 0.01
PRKDC-206ENST00000536429 STK3Q13188 491 aa15.13■□□□□ 0.01
PRKDC-206ENST00000536429 PFKFB3Q16875 520 aaPredicted RBP15.13■□□□□ 0.01
PRKDC-206ENST00000536429 C8orf34Q49A92 452 aa15.13■□□□□ 0.01
PRKDC-206ENST00000536429 FAM126BQ8IXS8 530 aa15.13■□□□□ 0.01
PRKDC-206ENST00000536429 BADQ92934 168 aa15.13■□□□□ 0.01
PRKDC-206ENST00000536429 INPP4AQ96PE3 977 aaPredicted RBP15.13■□□□□ 0.01
PRKDC-206ENST00000536429 PRKAG2Q9UGJ0 569 aa15.13■□□□□ 0.01
PRKDC-206ENST00000536429 KIAA0355O15063 1070 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 PRPF3O43395 683 aaKnown RBP15.12■□□□□ 0.01
PRKDC-206ENST00000536429 SCG2P13521 617 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 BMP8BP34820 402 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 ANAPC15P60006 121 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 PCNX4Q63HM2 1172 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 PPP1R18Q6NYC8 613 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 MTG1Q9BT17 334 aaPredicted RBP15.12■□□□□ 0.01
PRKDC-206ENST00000536429 SLC26A6Q9BXS9 759 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 UBE2OQ9C0C9 1292 aaKnown RBP15.12■□□□□ 0.01
PRKDC-206ENST00000536429 TRPV6Q9H1D0 765 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 RIC8AQ9NPQ8 531 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 TMEM39AQ9NV64 488 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 POLR3EQ9NVU0 708 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 TMEM260Q9NX78 707 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 TBX21Q9UL17 535 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 PCDHA6Q9UN73 950 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 TELO2Q9Y4R8 837 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 PCDHA8Q9Y5H6 950 aa15.12■□□□□ 0.01
PRKDC-206ENST00000536429 SMCO2A6NFE2 343 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 DCDC2CA8MYV0 355 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 SPATA31C2B4DYI2 1134 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 GGPS1O95749 300 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 CD4P01730 458 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 IFNAR1P17181 557 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 FXR1P51114 621 aaKnown RBP eCLIP15.11■□□□□ 0.017e-7■■■■□ 20
PRKDC-206ENST00000536429 ADCY7P51828 1080 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 NBPF20Q3BBV1 942 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 HSDL1Q3SXM5 330 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 CELF3Q5SZQ8 465 aaKnown RBP15.11■□□□□ 0.01
PRKDC-206ENST00000536429 MYSM1Q5VVJ2 828 aa15.11■□□□□ 0.01
PRKDC-206ENST00000536429 DHX37Q8IY37 1157 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms