RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 CASTP20810 708 aaKnown RBP16.47■□□□□ 0.23
UBE3B-206ENST00000536398 RPS6KB1P23443 525 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 ARHGAP1Q07960 439 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 ITGA7Q13683 1181 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 RTN1Q16799 776 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 FAM126BQ8IXS8 530 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 SAMD3Q8N6K7 520 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 SLC43A3Q8NBI5 491 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 BRF1Q92994 677 aa16.47■□□□□ 0.23
UBE3B-206ENST00000536398 DDX41Q9UJV9 622 aaKnown RBP16.47■□□□□ 0.23
UBE3B-206ENST00000536398 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 A0A1W2PPC1 479 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 A6NJR5 290 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 GOLGA8AA7E2F4 631 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 GOLGA8BA8MQT2 603 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 MEIS2O14770 477 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 SORBS3O60504 671 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 CABYRO75952 493 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 ADD1P35611 737 aaKnown RBP16.46■□□□□ 0.23
UBE3B-206ENST00000536398 CPT1AP50416 773 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 MRPS9P82933 396 aaKnown RBP16.46■□□□□ 0.23
UBE3B-206ENST00000536398 FGD1P98174 961 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 PURAQ00577 322 aaKnown RBP16.46■□□□□ 0.23
UBE3B-206ENST00000536398 HEATR3Q7Z4Q2 680 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 TDHQ8IZJ6 230 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 AFG1LQ8WV93 481 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 LRCH3Q96II8 777 aa16.46■□□□□ 0.23
UBE3B-206ENST00000536398 V9GY48 417 aaPredicted RBP16.46■□□□□ 0.23
UBE3B-206ENST00000536398 GH1P01241 217 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 CD4P01730 458 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 CCND2P30279 289 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 EPHB4P54760 987 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 SP2Q02086 613 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 UBE2SQ16763 222 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 TYW1BQ6NUM6 668 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 SMARCC2Q8TAQ2 1214 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 TRPV6Q9H1D0 765 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 BCAS3Q9H6U6 928 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 PSTPIP2Q9H939 334 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 POLR3EQ9NVU0 708 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 RBM28Q9NW13 759 aaKnown RBP16.45■□□□□ 0.22
UBE3B-206ENST00000536398 TBX21Q9UL17 535 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 MRVI1Q9Y6F6 885 aa16.45■□□□□ 0.22
UBE3B-206ENST00000536398 PIK3CDO00329 1044 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 RAG1P15918 1043 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 C9orf50Q5SZB4 431 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 WWC2Q6AWC2 1192 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 CUL5Q93034 780 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 LARP6Q9BRS8 491 aaKnown RBP16.44■□□□□ 0.22
UBE3B-206ENST00000536398 MTG1Q9BT17 334 aaPredicted RBP16.44■□□□□ 0.22
UBE3B-206ENST00000536398 ZSWIM6Q9HCJ5 1215 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 RTEL1Q9NZ71 1219 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 LTBP2Q14767 1821 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 FRMPD4Q14CM0 1322 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 MROH7Q68CQ1 1323 aa16.44■□□□□ 0.22
UBE3B-206ENST00000536398 B4GALT4O60513 344 aa16.43■□□□□ 0.22
UBE3B-206ENST00000536398 PPFIA3O75145 1194 aa16.43■□□□□ 0.22
UBE3B-206ENST00000536398 MMP3P08254 477 aa16.43■□□□□ 0.22
UBE3B-206ENST00000536398 PSMA5P28066 241 aa16.43■□□□□ 0.22
UBE3B-206ENST00000536398 METAP2P50579 478 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBE3B-206ENST00000536398 CHMP4BP1P59074 171 aa16.43■□□□□ 0.22
UBE3B-206ENST00000536398 SHHQ15465 462 aa16.43■□□□□ 0.22
UBE3B-206ENST00000536398 NBPF20Q3BBV1 942 aa16.43■□□□□ 0.22
UBE3B-206ENST00000536398 RUFY3Q7L099 469 aa16.43■□□□□ 0.22
UBE3B-206ENST00000536398 AGXT2Q9BYV1 514 aa16.43■□□□□ 0.22
UBE3B-206ENST00000536398 LAMA2P24043 3122 aaKnown RBP16.42■□□□□ 0.22
UBE3B-206ENST00000536398 EPB41L2O43491 1005 aaKnown RBP16.42■□□□□ 0.22
UBE3B-206ENST00000536398 TIMP1P01033 207 aa16.42■□□□□ 0.22
UBE3B-206ENST00000536398 CYP2C18P33260 490 aa16.42■□□□□ 0.22
UBE3B-206ENST00000536398 SEMA3FQ13275 785 aa16.42■□□□□ 0.22
UBE3B-206ENST00000536398 TOB2Q14106 344 aaPredicted RBP16.42■□□□□ 0.22
UBE3B-206ENST00000536398 BRDTQ58F21 947 aaPredicted RBP16.42■□□□□ 0.22
UBE3B-206ENST00000536398 DHX37Q8IY37 1157 aaKnown RBP16.42■□□□□ 0.22
UBE3B-206ENST00000536398 FBXL16Q8N461 479 aa16.42■□□□□ 0.22
UBE3B-206ENST00000536398 KAT2BQ92831 832 aa16.42■□□□□ 0.22
UBE3B-206ENST00000536398 UPF3BQ9BZI7 483 aaKnown RBP16.42■□□□□ 0.22
UBE3B-206ENST00000536398 PPP1R12CQ9BZL4 782 aa16.42■□□□□ 0.22
UBE3B-206ENST00000536398 ALDH8A1Q9H2A2 487 aaPredicted RBP16.42■□□□□ 0.22
UBE3B-206ENST00000536398 TRMT13Q9NUP7 481 aaKnown RBP16.42■□□□□ 0.22
UBE3B-206ENST00000536398 KIAA1217Q5T5P2 1943 aa16.41■□□□□ 0.22
UBE3B-206ENST00000536398 STXBP3O00186 592 aa16.41■□□□□ 0.22
UBE3B-206ENST00000536398 TLR3O15455 904 aaKnown RBP16.41■□□□□ 0.22
UBE3B-206ENST00000536398 UBA1P22314 1058 aaKnown RBP16.41■□□□□ 0.22
UBE3B-206ENST00000536398 RCAN1P53805 252 aa16.41■□□□□ 0.22
UBE3B-206ENST00000536398 CELF3Q5SZQ8 465 aaKnown RBP16.41■□□□□ 0.22
UBE3B-206ENST00000536398 MYSM1Q5VVJ2 828 aa16.41■□□□□ 0.22
UBE3B-206ENST00000536398 EMID1Q96A84 441 aaPredicted RBP16.41■□□□□ 0.22
UBE3B-206ENST00000536398 TELO2Q9Y4R8 837 aa16.41■□□□□ 0.22
UBE3B-206ENST00000536398 UMODL1Q5DID0 1318 aa16.41■□□□□ 0.22
UBE3B-206ENST00000536398 ADAMTS3O15072 1205 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 KPNA6O60684 536 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 GGPS1O95749 300 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 PDIA3P30101 505 aaKnown RBP16.4■□□□□ 0.22
UBE3B-206ENST00000536398 NAPAP54920 295 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
UBE3B-206ENST00000536398 LAMC2Q13753 1193 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 HSDL1Q3SXM5 330 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 LRIT3Q3SXY7 679 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 FAM47CQ5HY64 1035 aa16.4■□□□□ 0.22
UBE3B-206ENST00000536398 PHKBQ93100 1093 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms