RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 DUSP13Q9UII6 198 aa5.61□□□□□ -1.51
YBX3-205ENST00000536107 CNOT11Q9UKZ1 510 aaKnown RBP5.61□□□□□ -1.51
YBX3-205ENST00000536107 SBF1O95248 1867 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 RGPD5Q99666 1765 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 TOGARAM1Q9Y4F4 1720 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 ADAMTS7Q9UKP4 1686 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 MEGF6O75095 1541 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 PRAMEF27A3QJZ7 478 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 SERPINB2P05120 415 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 INPP5AQ14642 412 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 SOGA3Q5TF21 947 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 HHIPL2Q6UWX4 724 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 MPHOSPH9Q99550 1183 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 GPR20Q99678 358 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
YBX3-205ENST00000536107 THSD7BQ9C0I4 1608 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 NFAT5O94916 1531 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 USP31Q70CQ4 1352 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 KTN1Q86UP2 1357 aaKnown RBP5.59□□□□□ -1.51
YBX3-205ENST00000536107 LTBP3Q9NS15 1303 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 RBAK-RBAKDNI3L0D1 243 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 ENC1O14682 589 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 N4BP3O15049 544 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 GPR182O15218 404 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 NPHP1O15259 732 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 CILPO75339 1184 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 TM4SF1P30408 202 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 PLA2G5P39877 138 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 SRSF3P84103 164 aaKnown RBP5.59□□□□□ -1.51
YBX3-205ENST00000536107 PRAMEF13Q5VWM6 474 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 INTS3Q68E01 1043 aaKnown RBP5.59□□□□□ -1.51
YBX3-205ENST00000536107 LRFN4Q6PJG9 635 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 HDXQ7Z353 690 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 CDH24Q86UP0 819 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 NME9Q86XW9 330 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 GPC2Q8N158 579 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 PPP1R13LQ8WUF5 828 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 Q96M66 194 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 NIF3L1Q9GZT8 377 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 ZNF277Q9NRM2 450 aaPredicted RBP5.59□□□□□ -1.51
YBX3-205ENST00000536107 GPR160Q9UJ42 338 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 UBR3Q6ZT12 1888 aa5.59□□□□□ -1.51
YBX3-205ENST00000536107 BRCA1P38398 1863 aaKnown RBP5.58□□□□□ -1.52
YBX3-205ENST00000536107 COL6A3P12111 3177 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 USP42Q9H9J4 1324 aaKnown RBP5.58□□□□□ -1.52
YBX3-205ENST00000536107 OVOL3O00110 214 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 IRS4O14654 1257 aaPredicted RBP5.58□□□□□ -1.52
YBX3-205ENST00000536107 CYP27B1O15528 508 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 PAGE1O75459 146 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 EN2P19622 333 aaPredicted RBP5.58□□□□□ -1.52
YBX3-205ENST00000536107 EPHB3P54753 998 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 EIF6P56537 245 aaKnown RBP5.58□□□□□ -1.52
YBX3-205ENST00000536107 ARHGAP4P98171 946 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 VMACQ2NL98 169 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 USP50Q70EL3 339 aaPredicted RBP5.58□□□□□ -1.52
YBX3-205ENST00000536107 TSPYL5Q86VY4 417 aaPredicted RBP5.58□□□□□ -1.52
YBX3-205ENST00000536107 ANKS4BQ8N8V4 417 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 ZNF296Q8WUU4 475 aaPredicted RBP5.58□□□□□ -1.52
YBX3-205ENST00000536107 JDP2Q8WYK2 163 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 GLIS2Q9BZE0 524 aaPredicted RBP5.58□□□□□ -1.52
YBX3-205ENST00000536107 GPR62Q9BZJ7 368 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 CEP44Q9C0F1 390 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 GPATCH2Q9NW75 528 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 SIRT5Q9NXA8 310 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 CYP8B1Q9UNU6 501 aa5.58□□□□□ -1.52
YBX3-205ENST00000536107 SMG6Q86US8 1419 aaKnown RBP5.57□□□□□ -1.52
YBX3-205ENST00000536107 CENPJQ9HC77 1338 aaPredicted RBP5.57□□□□□ -1.52
YBX3-205ENST00000536107 LOC105371045A0A1W2PR82 267 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 ETV3P41162 512 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 EPS15P42566 896 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 ETF1P62495 437 aaKnown RBP5.57□□□□□ -1.52
YBX3-205ENST00000536107 ZXDAP98168 799 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 NBPF6Q5VWK0 638 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 RGMBQ6NW40 437 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 PI16Q6UXB8 463 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 LINC01356Q8N9X3 169 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 C3orf58Q8NDZ4 430 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 XAGE3Q8WTP9 111 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 DPF3Q92784 378 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 ALKBH8Q96BT7 664 aaKnown RBP5.57□□□□□ -1.52
YBX3-205ENST00000536107 PLPPR2Q96GM1 343 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 NBPF4Q96M43 638 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 PALD1Q9ULE6 856 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 CD163L1Q9NR16 1453 aa5.57□□□□□ -1.52
YBX3-205ENST00000536107 EVC2Q86UK5 1308 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 TRIOBPQ9H2D6 2365 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 TBC1D8O95759 1140 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 TNFRSF1AP19438 455 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 HOXC9P31274 260 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 CRKLP46109 303 aaKnown RBP5.56□□□□□ -1.52
YBX3-205ENST00000536107 DUSP4Q13115 394 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 RTP5Q14D33 572 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 CCDC93Q567U6 631 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 ADGRF1Q5T601 910 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 RASIP1Q5U651 963 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 CNKSR3Q6P9H4 555 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 TMEFF1Q8IYR6 380 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 DEFB123Q8N688 67 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 C2orf69Q8N8R5 385 aa5.56□□□□□ -1.52
YBX3-205ENST00000536107 CNTD2Q9H8S5 307 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms