RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 USP17L15C9J2P7 530 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 USP17L13C9JLJ4 530 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 USP17L11C9JVI0 530 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 USP17L18D6R9N7 530 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 USP17L22D6RA61 530 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 USP17L17D6RBQ6 530 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 USP17L19D6RCP7 530 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 USP17L20D6RJB6 530 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 PLCG1P19174 1290 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 KCNJ6P48051 423 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 BACE1P56817 501 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 USP17L24Q0WX57 530 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 KARSQ15046 597 aaKnown RBP9□□□□□ -0.97
COL21A1-212ENST00000535941 LETM2Q2VYF4 491 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 TBC1D10BQ4KMP7 808 aaPredicted RBP9□□□□□ -0.97
COL21A1-212ENST00000535941 ANGEL2Q5VTE6 544 aaKnown RBP9□□□□□ -0.97
COL21A1-212ENST00000535941 DCAF15Q66K64 600 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 USP17L6PQ6QN14 398 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 TMEM174Q8WUU8 243 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 SMARCE1Q969G3 411 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 DHX58Q96C10 678 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 NUDT12Q9BQG2 462 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 TRIM9Q9C026 710 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 VAT1LQ9HCJ6 419 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 IMPACTQ9P2X3 320 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 PNMA2Q9UL42 364 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 SMTNL1A8MU46 457 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 PSMD10O75832 226 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 SPATA31C1P0DKV0 1188 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 EPS15P42566 896 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 CABP7Q86V35 215 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 ADSSL1Q8N142 457 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 RAD54LQ92698 747 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 DNAJC19Q96DA6 116 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 COL20A1Q9P218 1284 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 RWDD2AQ9UIY3 292 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 RABGAP1Q9Y3P9 1069 aa9□□□□□ -0.97
COL21A1-212ENST00000535941 A0A1B0GTH6 734 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 UNCXA6NJT0 531 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 USP14P54578 494 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 CCDC144BQ3MJ40 725 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 SLFN12Q8IYM2 578 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 ZC3H15Q8WU90 426 aaKnown RBP8.99□□□□□ -0.97
COL21A1-212ENST00000535941 PRIMPOLQ96LW4 560 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 FAM20AQ96MK3 541 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 SLF1Q9BQI6 1058 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.99□□□□□ -0.97
COL21A1-212ENST00000535941 C19orf81C9J6K1 198 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 RPN1P04843 607 aaKnown RBP8.99□□□□□ -0.97
COL21A1-212ENST00000535941 SLC12A3P55017 1021 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 POLR3CQ9BUI4 534 aaPredicted RBP8.99□□□□□ -0.97
COL21A1-212ENST00000535941 STK24Q9Y6E0 443 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 PVALEFA0A1B0GWK0 134 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 MSH4O15457 936 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 SMC2O95347 1197 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 TPM3P06753 285 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 TAL1P17542 331 aaPredicted RBP8.99□□□□□ -0.97
COL21A1-212ENST00000535941 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.99□□□□□ -0.97
COL21A1-212ENST00000535941 KCNK18Q7Z418 384 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 IRF2BP1Q8IU81 584 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 PRPF38AQ8NAV1 312 aaKnown RBP8.99□□□□□ -0.97
COL21A1-212ENST00000535941 GGA3Q9NZ52 723 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 ZNF214Q9UL59 606 aaPredicted RBP8.99□□□□□ -0.97
COL21A1-212ENST00000535941 UBIAD1Q9Y5Z9 338 aa8.99□□□□□ -0.97
COL21A1-212ENST00000535941 CCDC66A2RUB6 948 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 MEIS1O00470 390 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 DHX15O43143 795 aaKnown RBP8.98□□□□□ -0.97
COL21A1-212ENST00000535941 NR1I3Q14994 352 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 ZCWPW2Q504Y3 356 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 CATSPERGQ6ZRH7 1159 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 USP50Q70EL3 339 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-212ENST00000535941 LDHDQ86WU2 507 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 TMEM139Q8IV31 216 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 KCNN1Q92952 543 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 LIMA1Q9UHB6 759 aaKnown RBP8.98□□□□□ -0.97
COL21A1-212ENST00000535941 KCNH4Q9UQ05 1017 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 KDM3AQ9Y4C1 1321 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 H7C1D1 291 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 VWA5AO00534 786 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 CASP1P29466 404 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 DSG3P32926 999 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 FAM193AP78312 1265 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 CCZ1BP86790 482 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 CCZ1P86791 482 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-212ENST00000535941 SPATA1Q5VX52 437 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 KIAA0895Q8NCT3 520 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 ZNF280CQ8ND82 737 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 FBXO28Q9NVF7 368 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 RMND1Q9NWS8 449 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 BCCIPQ9P287 314 aaKnown RBP eCLIP8.98□□□□□ -0.97
COL21A1-212ENST00000535941 DACH1Q9UI36 760 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 MRPL11Q9Y3B7 192 aaKnown RBP8.98□□□□□ -0.97
COL21A1-212ENST00000535941 ITIH6Q6UXX5 1313 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 A0A0G2JLL6 359 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-212ENST00000535941 CHRM1P11229 460 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-212ENST00000535941 TECP42680 631 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 SNAP25P60880 206 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 IRX5P78411 483 aaPredicted RBP8.98□□□□□ -0.97
COL21A1-212ENST00000535941 KMT5BQ4FZB7 885 aa8.98□□□□□ -0.97
COL21A1-212ENST00000535941 PCNX4Q63HM2 1172 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms