RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 A6NJR5 290 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 GCOM1H8Y6P7 765 aaPredicted RBP18.93■□□□□ 0.62
ATL3-202ENST00000535789 NKRFO15226 690 aaKnown RBP eCLIP18.93■□□□□ 0.62
ATL3-202ENST00000535789 REC8O95072 547 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 POLR2MP0CAP2 368 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 GNAQP50148 359 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 EPHB4P54760 987 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 APOBRQ0VD83 1088 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 TTLL4Q14679 1199 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 Q6ZUG5 572 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 SAMD3Q8N6K7 520 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 TET1Q8NFU7 2136 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 USP26Q9BXU7 913 aa18.93■□□□□ 0.62
ATL3-202ENST00000535789 DDX41Q9UJV9 622 aaKnown RBP18.93■□□□□ 0.62
ATL3-202ENST00000535789 ZBTB43O43298 467 aa18.92■□□□□ 0.62
ATL3-202ENST00000535789 MYCLP12524 364 aaPredicted RBP18.92■□□□□ 0.62
ATL3-202ENST00000535789 RPS6KB1P23443 525 aa18.92■□□□□ 0.62
ATL3-202ENST00000535789 MRPS9P82933 396 aaKnown RBP18.92■□□□□ 0.62
ATL3-202ENST00000535789 ITGA7Q13683 1181 aa18.92■□□□□ 0.62
ATL3-202ENST00000535789 RTN1Q16799 776 aa18.92■□□□□ 0.62
ATL3-202ENST00000535789 C9orf50Q5SZB4 431 aa18.92■□□□□ 0.62
ATL3-202ENST00000535789 WWC2Q6AWC2 1192 aa18.92■□□□□ 0.62
ATL3-202ENST00000535789 VSIG10LQ86VR7 867 aa18.92■□□□□ 0.62
ATL3-202ENST00000535789 PRKAG2Q9UGJ0 569 aa18.92■□□□□ 0.62
ATL3-202ENST00000535789 EYSQ5T1H1 3165 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 SIP14410 1827 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 GOLGA8AA7E2F4 631 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 GOLGA8BA8MQT2 603 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 B4DLN1 442 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 PIK3CDO00329 1044 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 EIF3JO75822 258 aaKnown RBP18.91■□□□□ 0.62
ATL3-202ENST00000535789 CABYRO75952 493 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 MMP3P08254 477 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 MYL3P08590 195 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 CPT1AP50416 773 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 MRPL12P52815 198 aaKnown RBP18.91■□□□□ 0.62
ATL3-202ENST00000535789 SP2Q02086 613 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 SEMA3FQ13275 785 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 BRF1Q92994 677 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 VTI1AQ96AJ9 217 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 BCAS3Q9H6U6 928 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 TMEM39AQ9NV64 488 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 SEC63Q9UGP8 760 aaKnown RBP18.91■□□□□ 0.62
ATL3-202ENST00000535789 UMODL1Q5DID0 1318 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 MROH7Q68CQ1 1323 aa18.91■□□□□ 0.62
ATL3-202ENST00000535789 B4GALT4O60513 344 aa18.9■□□□□ 0.62
ATL3-202ENST00000535789 HMGB1P09429 215 aaKnown RBP18.9■□□□□ 0.62
ATL3-202ENST00000535789 CASTP20810 708 aaKnown RBP18.9■□□□□ 0.62
ATL3-202ENST00000535789 TRAF1Q13077 416 aa18.9■□□□□ 0.62
ATL3-202ENST00000535789 UBE2SQ16763 222 aa18.9■□□□□ 0.62
ATL3-202ENST00000535789 BLOC1S2Q6QNY1 142 aa18.9■□□□□ 0.62
ATL3-202ENST00000535789 FBXL16Q8N461 479 aa18.9■□□□□ 0.62
ATL3-202ENST00000535789 AFG1LQ8WV93 481 aa18.9■□□□□ 0.62
ATL3-202ENST00000535789 TRPV6Q9H1D0 765 aa18.9■□□□□ 0.62
ATL3-202ENST00000535789 RBM28Q9NW13 759 aaKnown RBP18.9■□□□□ 0.62
ATL3-202ENST00000535789 DCDC2CA8MYV0 355 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 EPB41L2O43491 1005 aaKnown RBP18.89■□□□□ 0.61
ATL3-202ENST00000535789 ZEB2O60315 1214 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 SORBS3O60504 671 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 GH1P01241 217 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 UBA1P22314 1058 aaKnown RBP18.89■□□□□ 0.61
ATL3-202ENST00000535789 ADD1P35611 737 aaKnown RBP18.89■□□□□ 0.61
ATL3-202ENST00000535789 RCAN1P53805 252 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 TOB2Q14106 344 aaPredicted RBP18.89■□□□□ 0.61
ATL3-202ENST00000535789 LRIT3Q3SXY7 679 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 KAT2BQ92831 832 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 LBHD1Q9BQE6 289 aaPredicted RBP18.89■□□□□ 0.61
ATL3-202ENST00000535789 POLR3EQ9NVU0 708 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 TELO2Q9Y4R8 837 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 MRVI1Q9Y6F6 885 aa18.89■□□□□ 0.61
ATL3-202ENST00000535789 CHD9Q3L8U1 2897 aa18.88■□□□□ 0.61
ATL3-202ENST00000535789 KAT6AQ92794 2004 aa18.88■□□□□ 0.61
ATL3-202ENST00000535789 RBAK-RBAKDNI3L0D1 243 aa18.88■□□□□ 0.61
ATL3-202ENST00000535789 ADAMTS3O15072 1205 aa18.88■□□□□ 0.61
ATL3-202ENST00000535789 CCND2P30279 289 aa18.88■□□□□ 0.61
ATL3-202ENST00000535789 SHHQ15465 462 aa18.88■□□□□ 0.61
ATL3-202ENST00000535789 HEATR3Q7Z4Q2 680 aa18.88■□□□□ 0.61
ATL3-202ENST00000535789 EMID1Q96A84 441 aaPredicted RBP18.88■□□□□ 0.61
ATL3-202ENST00000535789 INPP4AQ96PE3 977 aaPredicted RBP18.88■□□□□ 0.61
ATL3-202ENST00000535789 MTG1Q9BT17 334 aaPredicted RBP18.88■□□□□ 0.61
ATL3-202ENST00000535789 PPP1R12CQ9BZL4 782 aa18.88■□□□□ 0.61
ATL3-202ENST00000535789 ALDH8A1Q9H2A2 487 aaPredicted RBP18.88■□□□□ 0.61
ATL3-202ENST00000535789 ZSWIM6Q9HCJ5 1215 aa18.88■□□□□ 0.61
ATL3-202ENST00000535789 TRMT13Q9NUP7 481 aaKnown RBP18.88■□□□□ 0.61
ATL3-202ENST00000535789 STXBP3O00186 592 aa18.87■□□□□ 0.61
ATL3-202ENST00000535789 TIMP1P01033 207 aa18.87■□□□□ 0.61
ATL3-202ENST00000535789 HOXD8P13378 290 aaPredicted RBP18.87■□□□□ 0.61
ATL3-202ENST00000535789 RAG1P15918 1043 aa18.87■□□□□ 0.61
ATL3-202ENST00000535789 METAP2P50579 478 aaKnown RBP eCLIP18.87■□□□□ 0.61
ATL3-202ENST00000535789 NBPF20Q3BBV1 942 aa18.87■□□□□ 0.61
ATL3-202ENST00000535789 SYNE3Q6ZMZ3 975 aa18.87■□□□□ 0.61
ATL3-202ENST00000535789 SMARCC2Q8TAQ2 1214 aa18.87■□□□□ 0.61
ATL3-202ENST00000535789 VWCEQ96DN2 955 aa18.87■□□□□ 0.61
ATL3-202ENST00000535789 CTAGE1Q96RT6 745 aa18.87■□□□□ 0.61
ATL3-202ENST00000535789 EVCP57679 992 aa18.86■□□□□ 0.61
ATL3-202ENST00000535789 NTRK3Q16288 839 aa18.86■□□□□ 0.61
ATL3-202ENST00000535789 HSDL1Q3SXM5 330 aa18.86■□□□□ 0.61
ATL3-202ENST00000535789 C8orf34Q49A92 452 aa18.86■□□□□ 0.61
ATL3-202ENST00000535789 MYSM1Q5VVJ2 828 aa18.86■□□□□ 0.61
ATL3-202ENST00000535789 RUFY3Q7L099 469 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms