RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 ERO1AQ96HE7 468 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 MEGF10Q96KG7 1140 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 UBL7Q96S82 380 aaPredicted RBP7.65□□□□□ -1.18
USP28-202ENST00000535607 TM9SF2Q99805 663 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 LGR6Q9HBX8 967 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 CTNNA3Q9UI47 895 aa7.65□□□□□ -1.18
USP28-202ENST00000535607 RGPD2P0DJD1 1756 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 GOLGA6L19H0YKK7 550 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 STX6O43752 255 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 GDF11O95390 407 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 PRKAR2BP31323 418 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 GBP1P32455 592 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 GIPRP48546 466 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 PDE1AP54750 535 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 KRT85P78386 507 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 NCBP1Q09161 790 aaKnown RBP7.64□□□□□ -1.19
USP28-202ENST00000535607 KCNMA1Q12791 1236 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 TERF2Q15554 542 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 ARSHQ5FYA8 562 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 OVOS1Q6IE37 1185 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 CDPF1Q6NVV7 123 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 CEP85Q6P2H3 762 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 BEND4Q6ZU67 534 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 NLRC3Q7RTR2 1065 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 MCATQ8IVS2 390 aaKnown RBP7.64□□□□□ -1.19
USP28-202ENST00000535607 FAM20CQ8IXL6 584 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 MRPL41Q8IXM3 137 aaKnown RBP7.64□□□□□ -1.19
USP28-202ENST00000535607 TXLNBQ8N3L3 684 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 TMEM151AQ8N4L1 468 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 MFSD2AQ8NA29 543 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 KIF18AQ8NI77 898 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 RUFY2Q8WXA3 655 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 ACSF2Q96CM8 615 aaPredicted RBP7.64□□□□□ -1.19
USP28-202ENST00000535607 ZNF830Q96NB3 372 aaPredicted RBP7.64□□□□□ -1.19
USP28-202ENST00000535607 FOXQ1Q9C009 403 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 GSX1Q9H4S2 264 aaPredicted RBP7.64□□□□□ -1.19
USP28-202ENST00000535607 ACSS3Q9H6R3 686 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 ZNF408Q9H9D4 720 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 DDX19AQ9NUU7 478 aaKnown RBP7.64□□□□□ -1.19
USP28-202ENST00000535607 PRKAG3Q9UGI9 489 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 LIMCH1Q9UPQ0 1083 aa7.64□□□□□ -1.19
USP28-202ENST00000535607 V9GYY5 206 aaPredicted RBP7.64□□□□□ -1.19
USP28-202ENST00000535607 ADAMTS7Q9UKP4 1686 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 DISP2A7MBM2 1401 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 RPAP1Q9BWH6 1393 aaPredicted RBP7.63□□□□□ -1.19
USP28-202ENST00000535607 ELP1O95163 1332 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 CTAGE5O15320 804 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 LRIG2O94898 1065 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 GNAI3P08754 354 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 ZNF853P0CG23 659 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 TNNT3P45378 269 aaPredicted RBP7.63□□□□□ -1.19
USP28-202ENST00000535607 KCNJ4P48050 445 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 GSDMDP57764 484 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 PTPN14Q15678 1187 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 CHRNA2Q15822 529 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 SULT6B1Q6IMI4 303 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 LSRQ86X29 649 aaPredicted RBP7.63□□□□□ -1.19
USP28-202ENST00000535607 RBBP8NLQ8NC74 664 aaPredicted RBP7.63□□□□□ -1.19
USP28-202ENST00000535607 CCDC74BQ96LY2 380 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 CHMP4AQ9BY43 222 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 TRIM5Q9C035 493 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 LRRCC1Q9C099 1032 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 SCAND2PQ9GZW5 306 aaPredicted RBP7.63□□□□□ -1.19
USP28-202ENST00000535607 NUP62CLQ9H1M0 184 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 SEMA6CQ9H3T2 930 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 TMEM51Q9NW97 253 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 ACTR10Q9NZ32 417 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 STOML1Q9UBI4 398 aa7.63□□□□□ -1.19
USP28-202ENST00000535607 MEGF6O75095 1541 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 TNS2Q63HR2 1409 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 FAM83GA6ND36 823 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 SLC22A31A6NKX4 558 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 MEIS3P2A8K0S8 358 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 ATP8B1O43520 1251 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 GNAI2P04899 355 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 GUCY2CP25092 1073 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 ANKRD1Q15327 319 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 AMOTQ4VCS5 1084 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 NBPF6Q5VWK0 638 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 PRAMEF13Q5VWM6 474 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 ZNF746Q6NUN9 644 aaPredicted RBP7.62□□□□□ -1.19
USP28-202ENST00000535607 ANKS3Q6ZW76 656 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 ARMCX6Q7L4S7 300 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 FILIP1Q7Z7B0 1213 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 CLEC10AQ8IUN9 316 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 XAGE3Q8WTP9 111 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 RAPGEF4Q8WZA2 1011 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 CHMP4CQ96CF2 233 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 SHDQ96IW2 340 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 NBPF4Q96M43 638 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 NOL10Q9BSC4 688 aaKnown RBP7.62□□□□□ -1.19
USP28-202ENST00000535607 TNMDQ9H2S6 317 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 BTG4Q9NY30 223 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 TJP2Q9UDY2 1190 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 THRAP3Q9Y2W1 955 aaKnown RBP7.62□□□□□ -1.19
USP28-202ENST00000535607 BCL9LQ86UU0 1499 aa7.62□□□□□ -1.19
USP28-202ENST00000535607 ATP10DQ9P241 1426 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 SHANK3Q9BYB0 1731 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 MAP3K5Q99683 1374 aa7.61□□□□□ -1.19
USP28-202ENST00000535607 THSD7AQ9UPZ6 1657 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms