RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 MB21D1Q8N884 522 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 IQUBQ8NA54 791 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 IL31RAQ8NI17 732 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 LRWD1Q9UFC0 647 aa22.94■■□□□ 1.26
TNFRSF1A-205ENST00000534885 ANO6Q4KMQ2 910 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 L1TD1Q5T7N2 865 aaKnown RBP22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CEP57L1Q8IYX8 460 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 MS4A4AQ96JQ5 239 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PLIN2Q99541 437 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PAGR1Q9BTK6 254 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 ACAD9Q9H845 621 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 MSH4O15457 936 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PDIA5Q14554 519 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 TKFCQ3LXA3 575 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PDXDC2PQ6P474 469 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 RASSF8Q8NHQ8 419 aa22.93■■□□□ 1.26
TNFRSF1A-205ENST00000534885 BIN1O00499 593 aa22.92■■□□□ 1.26
TNFRSF1A-205ENST00000534885 AFMP43652 599 aa22.92■■□□□ 1.26
TNFRSF1A-205ENST00000534885 NAALADL2Q58DX5 795 aa22.92■■□□□ 1.26
TNFRSF1A-205ENST00000534885 KANK3Q6NY19 840 aa22.92■■□□□ 1.26
TNFRSF1A-205ENST00000534885 SLFN12Q8IYM2 578 aa22.92■■□□□ 1.26
TNFRSF1A-205ENST00000534885 LRRC15Q8TF66 581 aa22.92■■□□□ 1.26
TNFRSF1A-205ENST00000534885 RAB34Q9BZG1 259 aa22.92■■□□□ 1.26
TNFRSF1A-205ENST00000534885 A1CFQ9NQ94 594 aaKnown RBP22.92■■□□□ 1.26
TNFRSF1A-205ENST00000534885 TUBE1Q9UJT0 475 aa22.92■■□□□ 1.26
TNFRSF1A-205ENST00000534885 TBX3O15119 743 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 EIF2AK2P19525 551 aaKnown RBP22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 STAT6P42226 847 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CEP55Q53EZ4 464 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 SH3RF1Q7Z6J0 888 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 STAMQ92783 540 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PAGE5Q96GU1 130 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 RMDN3Q96TC7 470 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PYM1Q9BRP8 204 aaKnown RBP22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 DNAJC25Q9H1X3 360 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 USP25Q9UHP3 1055 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 HOOK1Q9UJC3 728 aaKnown RBP22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PCDHA5Q9Y5H7 936 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 FRMPD4Q14CM0 1322 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CNMDO75829 334 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PLCG1P19174 1290 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PABPC4Q13310 644 aaKnown RBP eCLIP22.91■■□□□ 1.261e-20■■■□□ 18.3
TNFRSF1A-205ENST00000534885 STX1AQ16623 288 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 RRAGBQ5VZM2 374 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PLA2G4DQ86XP0 818 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 SPATC1LQ9H0A9 340 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 TXNRD2Q9NNW7 524 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CYP39A1Q9NYL5 469 aa22.91■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CASP1P29466 404 aa22.9■■□□□ 1.26
TNFRSF1A-205ENST00000534885 ISM2Q6H9L7 571 aa22.9■■□□□ 1.26
TNFRSF1A-205ENST00000534885 RIOX2Q8IUF8 465 aa22.9■■□□□ 1.26
TNFRSF1A-205ENST00000534885 MTRQ99707 1265 aa22.9■■□□□ 1.26
TNFRSF1A-205ENST00000534885 NUDT12Q9BQG2 462 aa22.9■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PXMP2Q9NR77 195 aa22.9■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CCDC39Q9UFE4 941 aa22.9■■□□□ 1.26
TNFRSF1A-205ENST00000534885 LCTP09848 1927 aa22.9■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CCL15-CCL14A0A0B4J2E2 113 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CETPP11597 493 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 OSBPP22059 807 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 GTF2A2P52657 109 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 SPIRE1Q08AE8 756 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 PGM5Q15124 567 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 CCL15Q16663 113 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 SPRYD7Q5W111 196 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 C11orf57Q6ZUT1 292 aaPredicted RBP22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 FAM20AQ96MK3 541 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 RBPJLQ9UBG7 517 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 RABGAP1Q9Y3P9 1069 aa22.89■■□□□ 1.26
TNFRSF1A-205ENST00000534885 MEIS1O00470 390 aa22.89■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ITGB5P18084 799 aa22.89■■□□□ 1.25
TNFRSF1A-205ENST00000534885 HUNKP57058 714 aa22.89■■□□□ 1.25
TNFRSF1A-205ENST00000534885 MRPS9P82933 396 aaKnown RBP22.89■■□□□ 1.25
TNFRSF1A-205ENST00000534885 PCNX4Q63HM2 1172 aa22.89■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CHST13Q8NET6 341 aa22.89■■□□□ 1.25
TNFRSF1A-205ENST00000534885 SNX29Q8TEQ0 813 aa22.89■■□□□ 1.25
TNFRSF1A-205ENST00000534885 BRI3BPQ8WY22 251 aa22.89■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CYP2C8P10632 490 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 GRB10Q13322 594 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 DPCR1Q3MIW9 517 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 MXRA8Q9BRK3 442 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 PDCD2LQ9BRP1 358 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 MOV10L1Q9BXT6 1211 aaKnown RBP22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ANO10Q9NW15 660 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 BTBD19C9JJ37 291 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ARP10275 920 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ARHGEF16Q5VV41 709 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CCDC34Q96HJ3 373 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 R3HDMLQ9H3Y0 253 aa22.88■■□□□ 1.25
TNFRSF1A-205ENST00000534885 ZBTB48P10074 688 aaPredicted RBP22.87■■□□□ 1.25
TNFRSF1A-205ENST00000534885 KRT79Q5XKE5 535 aa22.87■■□□□ 1.25
TNFRSF1A-205ENST00000534885 NCAPG2Q86XI2 1143 aa22.87■■□□□ 1.25
TNFRSF1A-205ENST00000534885 FAM200AQ8TCP9 573 aa22.87■■□□□ 1.25
TNFRSF1A-205ENST00000534885 CALML4Q96GE6 196 aa22.87■■□□□ 1.25
TNFRSF1A-205ENST00000534885 PNMA5Q96PV4 448 aa22.87■■□□□ 1.25
TNFRSF1A-205ENST00000534885 SARSP49591 514 aaKnown RBP22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 SETQ01105 290 aaPredicted RBP22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 Q3C1V9 767 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 NT5DC1Q5TFE4 455 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 SPATA20Q8TB22 786 aa22.86■■□□□ 1.25
TNFRSF1A-205ENST00000534885 SMARCE1Q969G3 411 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms