RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 MAGEB10Q96LZ2 347 aaPredicted RBP9.33□□□□□ -0.92
CASP4-213ENST00000534356 ALG1Q9BT22 464 aa9.33□□□□□ -0.92
CASP4-213ENST00000534356 IPPKQ9H8X2 491 aa9.33□□□□□ -0.92
CASP4-213ENST00000534356 RXFP1Q9HBX9 757 aa9.33□□□□□ -0.92
CASP4-213ENST00000534356 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.33□□□□□ -0.92
CASP4-213ENST00000534356 NUDT19A8MXV4 375 aa9.32□□□□□ -0.92
CASP4-213ENST00000534356 ARVCFO00192 962 aa9.32□□□□□ -0.92
CASP4-213ENST00000534356 SRGAP3O43295 1099 aa9.32□□□□□ -0.92
CASP4-213ENST00000534356 MPOP05164 745 aa9.32□□□□□ -0.92
CASP4-213ENST00000534356 SDSP20132 328 aa9.32□□□□□ -0.92
CASP4-213ENST00000534356 RBM10P98175 930 aaKnown RBP9.32□□□□□ -0.92
CASP4-213ENST00000534356 DALRD3Q5D0E6 543 aaKnown RBP9.32□□□□□ -0.92
CASP4-213ENST00000534356 EGFLAMQ63HQ2 1017 aa9.32□□□□□ -0.92
CASP4-213ENST00000534356 WWC2Q6AWC2 1192 aa9.32□□□□□ -0.92
CASP4-213ENST00000534356 CABP7Q86V35 215 aa9.32□□□□□ -0.92
CASP4-213ENST00000534356 IRF2BP1Q8IU81 584 aa9.32□□□□□ -0.92
CASP4-213ENST00000534356 TCRBV16S1A1N1A0A5B0 115 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 ZC3H12DA2A288 527 aaKnown RBP9.31□□□□□ -0.92
CASP4-213ENST00000534356 OR14I1A6ND48 311 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 DNAJC8O75937 253 aaPredicted RBP9.31□□□□□ -0.92
CASP4-213ENST00000534356 CYBBP04839 570 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 NAT1P18440 290 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 PAK1Q13153 545 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 RAB3GAP1Q15042 981 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 MROH9Q5TGP6 573 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 PAQR3Q6TCH7 311 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 RIOX2Q8IUF8 465 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 PCDH19Q8TAB3 1148 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 NINJ1Q92982 152 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 KCNJ15Q99712 375 aa9.31□□□□□ -0.92
CASP4-213ENST00000534356 COA3Q9Y2R0 106 aaPredicted RBP9.31□□□□□ -0.92
CASP4-213ENST00000534356 GYS2P54840 703 aa9.3□□□□□ -0.92
CASP4-213ENST00000534356 RPTNQ6XPR3 784 aa9.3□□□□□ -0.92
CASP4-213ENST00000534356 PRR23BQ6ZRT6 265 aa9.3□□□□□ -0.92
CASP4-213ENST00000534356 KRTAP1-3Q8IUG1 177 aa9.3□□□□□ -0.92
CASP4-213ENST00000534356 NETO2Q8NC67 525 aa9.3□□□□□ -0.92
CASP4-213ENST00000534356 KLHL14Q9P2G3 628 aa9.3□□□□□ -0.92
CASP4-213ENST00000534356 SIT1Q9Y3P8 196 aa9.3□□□□□ -0.92
CASP4-213ENST00000534356 HCFC2Q9Y5Z7 792 aa9.3□□□□□ -0.92
CASP4-213ENST00000534356 FAM47E-STBD1D6RA91 191 aa9.29□□□□□ -0.92
CASP4-213ENST00000534356 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
CASP4-213ENST00000534356 SRGAP2CP0DJJ0 459 aa9.29□□□□□ -0.92
CASP4-213ENST00000534356 ZC3H7AQ8IWR0 971 aaKnown RBP9.29□□□□□ -0.92
CASP4-213ENST00000534356 DHX37Q8IY37 1157 aaKnown RBP9.29□□□□□ -0.92
CASP4-213ENST00000534356 NIM1KQ8IY84 436 aa9.29□□□□□ -0.92
CASP4-213ENST00000534356 DIRC2Q96SL1 478 aa9.29□□□□□ -0.92
CASP4-213ENST00000534356 EPB41L1Q9H4G0 881 aa9.29□□□□□ -0.92
CASP4-213ENST00000534356 KCNK12Q9HB15 430 aa9.29□□□□□ -0.92
CASP4-213ENST00000534356 IRS4O14654 1257 aaPredicted RBP9.28□□□□□ -0.92
CASP4-213ENST00000534356 KCNA6P17658 529 aa9.28□□□□□ -0.92
CASP4-213ENST00000534356 YBX1P67809 324 aaKnown RBP9.28□□□□□ -0.92
CASP4-213ENST00000534356 NR1I3Q14994 352 aa9.28□□□□□ -0.92
CASP4-213ENST00000534356 ZNF605Q86T29 641 aa9.28□□□□□ -0.92
CASP4-213ENST00000534356 NSUN3Q9H649 340 aaKnown RBP9.28□□□□□ -0.92
CASP4-213ENST00000534356 ZNF552Q9H707 407 aaPredicted RBP9.28□□□□□ -0.92
CASP4-213ENST00000534356 PLAAQ9Y263 795 aa9.28□□□□□ -0.92
CASP4-213ENST00000534356 TNPO3Q9Y5L0 923 aaKnown RBP9.28□□□□□ -0.92
CASP4-213ENST00000534356 WNT9AO14904 365 aa9.27□□□□□ -0.93
CASP4-213ENST00000534356 DGKIO75912 1065 aa9.27□□□□□ -0.93
CASP4-213ENST00000534356 CLSTN1O94985 981 aa9.27□□□□□ -0.93
CASP4-213ENST00000534356 ZNF460Q14592 562 aa9.27□□□□□ -0.93
CASP4-213ENST00000534356 MLANAQ16655 118 aa9.27□□□□□ -0.93
CASP4-213ENST00000534356 ABHD17CQ6PCB6 329 aa9.27□□□□□ -0.93
CASP4-213ENST00000534356 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.27□□□□□ -0.93
CASP4-213ENST00000534356 FAM53CQ9NYF3 392 aa9.27□□□□□ -0.93
CASP4-213ENST00000534356 SHROOM4Q9ULL8 1493 aa9.27□□□□□ -0.93
CASP4-213ENST00000534356 LRRC10BA6NIK2 292 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 SGSM2O43147 1006 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 OPA1O60313 960 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 CKMP06732 381 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 PYGMP11217 842 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 COL6A2P12110 1019 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 SLC6A11P48066 632 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 MAPKAPK2P49137 400 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 PRR5P85299 388 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 PLEKHN1Q494U1 663 aaPredicted RBP9.26□□□□□ -0.93
CASP4-213ENST00000534356 DCP2Q8IU60 420 aaKnown RBP9.26□□□□□ -0.93
CASP4-213ENST00000534356 PIP4K2CQ8TBX8 421 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 FBXW5Q969U6 566 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 PEX11GQ96HA9 241 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 MAGEC2Q9UBF1 373 aaPredicted RBP9.26□□□□□ -0.93
CASP4-213ENST00000534356 DBR1Q9UK59 544 aaKnown RBP9.26□□□□□ -0.93
CASP4-213ENST00000534356 COQ6Q9Y2Z9 468 aa9.26□□□□□ -0.93
CASP4-213ENST00000534356 ASLP04424 464 aa9.25□□□□□ -0.93
CASP4-213ENST00000534356 GNAT1P11488 350 aa9.25□□□□□ -0.93
CASP4-213ENST00000534356 VIPR1P32241 457 aa9.25□□□□□ -0.93
CASP4-213ENST00000534356 IGFALSP35858 605 aa9.25□□□□□ -0.93
CASP4-213ENST00000534356 OTOP3Q7RTS5 596 aa9.25□□□□□ -0.93
CASP4-213ENST00000534356 SEC14L1Q92503 715 aa9.25□□□□□ -0.93
CASP4-213ENST00000534356 MFSD3Q96ES6 412 aa9.25□□□□□ -0.93
CASP4-213ENST00000534356 SLKQ9H2G2 1235 aaPredicted RBP9.25□□□□□ -0.93
CASP4-213ENST00000534356 EPB41L4BQ9H329 900 aa9.25□□□□□ -0.93
CASP4-213ENST00000534356 DCP1AQ9NPI6 582 aaPredicted RBP9.25□□□□□ -0.93
CASP4-213ENST00000534356 INTS7Q9NVH2 962 aaKnown RBP9.25□□□□□ -0.93
CASP4-213ENST00000534356 NUDT5Q9UKK9 219 aa9.25□□□□□ -0.93
CASP4-213ENST00000534356 ABLIM1O14639 778 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 NKRFO15226 690 aaKnown RBP eCLIP9.24□□□□□ -0.93
CASP4-213ENST00000534356 APPP05067 770 aa9.24□□□□□ -0.93
CASP4-213ENST00000534356 DNM2P50570 870 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms