RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 OTUD7BQ6GQQ9 843 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 SH3RF1Q7Z6J0 888 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 C2CD5Q86YS7 1000 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 SPATA20Q8TB22 786 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 ZNF398Q8TD17 642 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CAPZA3Q96KX2 299 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CFAP57Q96MR6 1250 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 SELENOSQ9BQE4 189 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.42□□□□□ -1.7
SOX6-217ENST00000533870 ANKIB1Q9P2G1 1089 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 FBXL5Q9UKA1 691 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 CTNND2Q9UQB3 1225 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 PDS5AQ29RF7 1337 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 MAGEB6P1A0A0J9YX57 407 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 USP27XA6NNY8 438 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 SLC16A3O15427 465 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 FOXO3O43524 673 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 KCNA6P17658 529 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 SARSP49591 514 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 DRG2P55039 364 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 GSCP56915 257 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 ARHGAP4P98171 946 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 PPARAQ07869 468 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 STAT4Q14765 748 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 SPDYAQ5MJ70 313 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 GPATCH4Q5T3I0 446 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 TEDDM1Q5T9Z0 273 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 ALKBH5Q6P6C2 394 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 PDXDC1Q6P996 788 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 COL23A1Q86Y22 540 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 IFNLR1Q8IU57 520 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 SH3TC2Q8TF17 1288 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 AENQ8WTP8 325 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.42□□□□□ -1.7
SOX6-217ENST00000533870 CCDC113Q9H0I3 377 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 IFT122Q9HBG6 1241 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 HAUS2Q9NVX0 235 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 KDM6AO15550 1401 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 TLDC2A0PJX2 215 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 KIAA0391O15091 583 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 FDPSP14324 419 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 ADD2P35612 726 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 ADCY7P51828 1080 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 RAD9BQ6WBX8 426 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 GIMAP8Q8ND71 665 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 CATSPER1Q8NEC5 780 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 MYCBPAPQ8TBZ2 947 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 UBLCP1Q8WVY7 318 aaPredicted RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 STRBPQ96SI9 672 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 TRIM4Q9C037 500 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 VCPKMTQ9H867 229 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 MRPL40Q9NQ50 206 aaKnown RBP4.42□□□□□ -1.7
SOX6-217ENST00000533870 DISC1Q9NRI5 854 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 IL1RAPL1Q9NZN1 696 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 SEL1LQ9UBV2 794 aa4.42□□□□□ -1.7
SOX6-217ENST00000533870 A0A0A6YYK5 440 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 TBX3O15119 743 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 NOL3O60936 208 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 HNRNPH1P31943 449 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 FNTAP49354 379 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 YWHAEP62258 255 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 AP3B2Q13367 1082 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 PDCLQ13371 301 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 LRRC23Q53EV4 343 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 CYFIP1Q7L576 1253 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 PPP1R14BQ96C90 147 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 CNOT6LQ96LI5 555 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 CCDC17Q96LX7 622 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 TSC22D3Q99576 134 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 FAM192AQ9GZU8 254 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 SH2D4AQ9H788 454 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 FBXO2Q9UK22 296 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 RTCBQ9Y3I0 505 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 KIAA1210Q9ULL0 1709 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 BTNL10A8MVZ5 291 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 CASQ2O14958 399 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 GPTP24298 496 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 SNRPFP62306 86 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 RIPPLY1Q0D2K3 151 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 INF2Q27J81 1249 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 CFAP157Q5JU67 520 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 RRAGAQ7L523 313 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 PASD1Q8IV76 773 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 TRMT44Q8IYL2 757 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 LARP4BQ92615 738 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 HVCN1Q96D96 273 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 ZSCAN10Q96SZ4 725 aaPredicted RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 CLIC4Q9Y696 253 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 PITPNM2Q9BZ72 1349 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 WFS1O76024 890 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 ECEL1O95672 775 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 MUTP22033 750 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 AMPD2Q01433 879 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 SYCP2LQ5T4T6 812 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 NAA35Q5VZE5 725 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 IRGCQ6NXR0 463 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 SHC4Q6S5L8 630 aa4.41□□□□□ -1.7
SOX6-217ENST00000533870 DZIP1Q86YF9 867 aaKnown RBP4.41□□□□□ -1.7
SOX6-217ENST00000533870 MYO3AQ8NEV4 1616 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms